RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GBP3Q9H0R5 595 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 DBR1Q9UK59 544 aaKnown RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 ARHGEF35A5YM69 484 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 SPDYE16A6NNV3 312 aaPredicted RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 NDC80O14777 642 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 BACH1O14867 736 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 BUB1O43683 1085 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 LRRN2O75325 713 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 MYL3P08590 195 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 YWHABP31946 246 aaKnown RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 QARSP47897 775 aaKnown RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 BAATQ14032 418 aaPredicted RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 LONRF2Q1L5Z9 754 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 EMC10Q5UCC4 262 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 NFRKBQ6P4R8 1299 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 DLK2Q6UY11 383 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 MAEAQ7L5Y9 396 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 SLC9A9Q8IVB4 645 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 FAM186BQ8IYM0 893 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 ANKK1Q8NFD2 765 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 LMO3Q8TAP4 145 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 SPOCK2Q92563 424 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 LRRC45Q96CN5 670 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 GPRC5CQ9NQ84 441 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 RNF146Q9NTX7 359 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 GGA3Q9NZ52 723 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 GPRC5DQ9NZD1 345 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 EHD2Q9NZN4 543 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 PFDN2Q9UHV9 154 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 PCDHGC5Q9Y5F6 944 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 NCK2O43639 380 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 USO1O60763 962 aaKnown RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 SMIM24O75264 130 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 STBD1O95210 358 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 TRIM49P0CI25 452 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 TRIM49CP0CI26 452 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 ATP5DP30049 168 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 CHKAP35790 457 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 PSMC2P35998 433 aaKnown RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 EPS15P42566 896 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 PSMC4P43686 418 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 FMO5P49326 533 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 GUCY2FP51841 1108 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 DLG4P78352 724 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 KLHL30Q0D2K2 578 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 CBX3Q13185 183 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 C1orf220Q5T0J3 134 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 TCERG1LQ5VWI1 586 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 WDR93Q6P2C0 686 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 NSMFQ6X4W1 530 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 ANO5Q75V66 913 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 TAOK1Q7L7X3 1001 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 VSIG10LQ86VR7 867 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 C4orf19Q8IY42 314 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 KIRREL3Q8IZU9 778 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 SMYD1Q8NB12 490 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 PPP1R14CQ8TAE6 165 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 PLEKHO2Q8TD55 490 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 HVCN1Q96D96 273 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 INPP4AQ96PE3 977 aaPredicted RBP5.42□□□□□ -1.54
TMEM260-210ENST00000556422 SYT11Q9BT88 431 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 TBC1D22BQ9NU19 505 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 SMARCAL1Q9NZC9 954 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 ATPIF1Q9UII2 106 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 L1RE1Q9UN81 338 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 ANGPTL3Q9Y5C1 460 aa5.42□□□□□ -1.54
TMEM260-210ENST00000556422 PFASO15067 1338 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 LRRC72A6NJI9 287 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 BHMG1C9JSJ3 638 aaPredicted RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 K7ENM7 598 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 ZNF862O60290 1169 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 EVI5O60447 810 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 TMEM127O75204 238 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 MYCLP12524 364 aaPredicted RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 PRLRP16471 622 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 CXCR5P32302 372 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 DSG3P32926 999 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 S100A5P33763 92 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 CYP2J2P51589 502 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 NPEPPSP55786 919 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 NAB2Q15742 525 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 CLPPQ16740 277 aaPredicted RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 DCAF15Q66K64 600 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 PLA2G4FQ68DD2 849 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 SNRNP48Q6IEG0 339 aaKnown RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 SLC44A2Q8IWA5 706 aaPredicted RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 LINC00469Q8N7U9 141 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 CBWD1Q9BRT8 395 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 ABCB6Q9NP58 842 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 ARFGAP3Q9NP61 516 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 NAGPAQ9UK23 515 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 SAMM50Q9Y512 469 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 MGAMO43451 1857 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 ATP2A1O14983 1001 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 AHCYL1O43865 530 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 PEX10O60683 326 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 TACC1O75410 805 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 BPNT1O95861 308 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 ZBTB48P10074 688 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms