RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 GOLGA8JA6NMD2 632 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 PER2O15055 1255 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 NCK2O43639 380 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 TADA2AO75478 443 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 LDHAP00338 332 aaKnown RBP10.48□□□□□ -0.73
SRP54-210ENST00000556380 LRPAP1P30533 357 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 DSG1Q02413 1049 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 PPP2R3AQ06190 1150 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 ADAM15Q13444 863 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 SMC1AQ14683 1233 aaKnown RBP10.48□□□□□ -0.73
SRP54-210ENST00000556380 PTPN14Q15678 1187 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 DUSP6Q16828 381 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 SPATA1Q5VX52 437 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 PLPP4Q5VZY2 271 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 FUT10Q6P4F1 479 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 TMEM184AQ6ZMB5 413 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 BRSK2Q8IWQ3 736 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 EFHBQ8N7U6 833 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 VN1R2Q8NFZ6 395 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 MICAL1Q8TDZ2 1067 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 AUTS2Q8WXX7 1259 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 ERCC4Q92889 916 aaPredicted RBP10.48□□□□□ -0.73
SRP54-210ENST00000556380 PABPC5Q96DU9 382 aaKnown RBP10.48□□□□□ -0.73
SRP54-210ENST00000556380 GSDMAQ96QA5 445 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 PCIF1Q9H4Z3 704 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 TLE6Q9H808 572 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 RXFP1Q9HBX9 757 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 ENTPD7Q9NQZ7 604 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 HSPBP1Q9NZL4 362 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 CGNQ9P2M7 1197 aaKnown RBP10.48□□□□□ -0.73
SRP54-210ENST00000556380 TUBGCP4Q9UGJ1 667 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 DERAQ9Y315 318 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 C2CD2Q9Y426 696 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 PCDHA5Q9Y5H7 936 aa10.48□□□□□ -0.73
SRP54-210ENST00000556380 ATG2AQ2TAZ0 1938 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 PODXLO00592 558 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 PDXKO00764 312 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 CLIC2O15247 247 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 LINC01565O15544 149 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 KINO60870 393 aaKnown RBP10.47□□□□□ -0.73
SRP54-210ENST00000556380 B3GAT3O94766 335 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 CSPG5O95196 566 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 IL18RAPO95256 599 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 NFICP08651 508 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 NRIP1P48552 1158 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 GUCY2FP51841 1108 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 DLX2Q07687 328 aaPredicted RBP10.47□□□□□ -0.73
SRP54-210ENST00000556380 JADE1Q6IE81 842 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 ARMCX5Q6P1M9 558 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 RBM23Q86U06 439 aaKnown RBP10.47□□□□□ -0.73
SRP54-210ENST00000556380 CBWD2Q8IUF1 395 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 SLC9A9Q8IVB4 645 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 EFCAB13Q8IY85 973 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 GPD1LQ8N335 351 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 GUF1Q8N442 669 aaKnown RBP10.47□□□□□ -0.73
SRP54-210ENST00000556380 CXorf38Q8TB03 319 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 GOLGA5Q8TBA6 731 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 HLA-CQ95604 372 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 CCDC34Q96HJ3 373 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 CDCA3Q99618 268 aaPredicted RBP10.47□□□□□ -0.73
SRP54-210ENST00000556380 PRR14Q9BWN1 585 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 GZF1Q9H116 711 aaPredicted RBP10.47□□□□□ -0.73
SRP54-210ENST00000556380 UBE2ZQ9H832 354 aaPredicted RBP10.47□□□□□ -0.73
SRP54-210ENST00000556380 KIAA1586Q9HCI6 787 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 LMBRD1Q9NUN5 540 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 UBQLN1Q9UMX0 589 aaKnown RBP10.47□□□□□ -0.73
SRP54-210ENST00000556380 COG5Q9UP83 839 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.47□□□□□ -0.73
SRP54-210ENST00000556380 VCANP13611 3396 aa10.47□□□□□ -0.73
SRP54-210ENST00000556380 ANO9A1A5B4 782 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 ZNF233A6NK53 670 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 PIRO00625 290 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 CLASP2O75122 1294 aaKnown RBP10.46□□□□□ -0.73
SRP54-210ENST00000556380 SMC2O95347 1197 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 GLP2RO95838 553 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 CNPP09543 421 aaKnown RBP10.46□□□□□ -0.73
SRP54-210ENST00000556380 BMP6P22004 513 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 FGFR3P22607 806 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 GLUD2P49448 558 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 AARSP49588 968 aaKnown RBP eCLIP10.46□□□□□ -0.73
SRP54-210ENST00000556380 RBM10P98175 930 aaKnown RBP10.46□□□□□ -0.73
SRP54-210ENST00000556380 TFF2Q03403 129 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 MYBPC2Q14324 1141 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 TMEM132DQ14C87 1099 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 SKIV2LQ15477 1246 aaKnown RBP10.46□□□□□ -0.73
SRP54-210ENST00000556380 USP41Q3LFD5 358 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 ZCWPW2Q504Y3 356 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 COBLL1Q53SF7 1204 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 RTP2Q5QGT7 225 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 FAM171A1Q5VUB5 890 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 SCARA3Q6AZY7 606 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 HS2ST1Q7LGA3 356 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 NT5DC4Q86YG4 428 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 XXYLT1Q8NBI6 393 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 LNX1Q8TBB1 728 aaPredicted RBP10.46□□□□□ -0.73
SRP54-210ENST00000556380 HASPINQ8TF76 798 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 SLC22A17Q8WUG5 538 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 PPP2R3CQ969Q6 453 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 CCDC47Q96A33 483 aaKnown RBP10.46□□□□□ -0.73
SRP54-210ENST00000556380 MSLNLQ96KJ4 702 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms