RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 PJA2O43164 708 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 PLEKP08567 350 aaPredicted RBP18.38■□□□□ 0.53
SYNE3-204ENST00000555759 THRAP10827 490 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 TPP2P29144 1249 aaPredicted RBP18.38■□□□□ 0.53
SYNE3-204ENST00000555759 HMOX2P30519 316 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 KCNJ1P48048 391 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 IMPG1Q17R60 797 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 FOXP4Q8IVH2 680 aaPredicted RBP18.38■□□□□ 0.53
SYNE3-204ENST00000555759 IL25Q9H293 177 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 PARVBQ9HBI1 364 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 NEMP1O14524 444 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 ATP4AP20648 1035 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 TNFRSF8P28908 595 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 RUNX1T1Q06455 604 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 EFHC1Q5JVL4 640 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 TMEM179Q6ZVK1 233 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 EIF2AK1Q9BQI3 630 aaKnown RBP18.38■□□□□ 0.53
SYNE3-204ENST00000555759 GDF3Q9NR23 364 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 DUSP10Q9Y6W6 482 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 METP08581 1390 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 CLK1P49759 484 aaKnown RBP18.37■□□□□ 0.53
SYNE3-204ENST00000555759 KRT76Q01546 638 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 STX5Q13190 355 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 KBTBD12Q3ZCT8 623 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 CROCCP3Q8IVE0 287 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 MPP4Q96JB8 637 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 MAP3K14Q99558 947 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 KLHL25Q9H0H3 589 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 ARHGEF37A1IGU5 675 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 ALBP02768 609 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 MYL2P10916 166 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 SFNP31947 248 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 PDXDC2PQ6P474 469 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 INPP5DQ92835 1189 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 PGM2Q96G03 612 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 NSMCE4AQ9NXX6 385 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 STAP1Q9ULZ2 295 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 IQGAP3Q86VI3 1631 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.37■□□□□ 0.53
SYNE3-204ENST00000555759 USP17L15C9J2P7 530 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 USP17L13C9JLJ4 530 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 USP17L11C9JVI0 530 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 USP17L18D6R9N7 530 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 USP17L22D6RA61 530 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 USP17L17D6RBQ6 530 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 USP17L19D6RCP7 530 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 USP17L20D6RJB6 530 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 CRKLP46109 303 aaKnown RBP18.37■□□□□ 0.53
SYNE3-204ENST00000555759 USP17L24Q0WX57 530 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 USP17L6PQ6QN14 398 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 TMEM117Q9H0C3 514 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 MMADHCQ9H3L0 296 aaPredicted RBP18.37■□□□□ 0.53
SYNE3-204ENST00000555759 KCND2Q9NZV8 630 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 AKT3Q9Y243 479 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 IQSEC2Q5JU85 1478 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 TCP10L2B9ZVM9 353 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 CD44P16070 742 aaKnown RBP18.37■□□□□ 0.53
SYNE3-204ENST00000555759 SPRP35270 261 aaPredicted RBP18.37■□□□□ 0.53
SYNE3-204ENST00000555759 MTDHQ86UE4 582 aaKnown RBP18.37■□□□□ 0.53
SYNE3-204ENST00000555759 TMPRSS6Q8IU80 811 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 ZNF786Q8N393 782 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 FRMD8P1Q9BZ68 369 aaPredicted RBP18.37■□□□□ 0.53
SYNE3-204ENST00000555759 SLC24A2Q9UI40 661 aa18.37■□□□□ 0.53
SYNE3-204ENST00000555759 TM9SF1O15321 606 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 KCNN4O15554 427 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 QARSP47897 775 aaKnown RBP18.36■□□□□ 0.53
SYNE3-204ENST00000555759 ZC3H12BQ5HYM0 836 aaKnown RBP18.36■□□□□ 0.53
SYNE3-204ENST00000555759 C1orf228Q6PIY5 440 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 ZNF677Q86XU0 584 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 HOMEZQ8IX15 550 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 ZNF507Q8TCN5 953 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 ADAM33Q9BZ11 813 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 CNGB3Q9NQW8 809 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 RAB6BQ9NRW1 208 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 COPG1Q9Y678 874 aaKnown RBP18.36■□□□□ 0.53
SYNE3-204ENST00000555759 A0A087X0T9 212 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 UBAP1LF5GYI3 381 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 FAM228BP0C875 321 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 TNFAIP2Q03169 654 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 ZNF844Q08AG5 666 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 BTBD10Q9BSF8 475 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 GTF3C4Q9UKN8 822 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 CORO1CQ9ULV4 474 aaPredicted RBP18.36■□□□□ 0.53
SYNE3-204ENST00000555759 LOC100653049A0A140TA62 436 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 M0QYV0 167 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 KRT34O76011 436 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 ABL1P00519 1130 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 FAM58BPP0C7Q3 252 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 NDUFAF2Q8N183 169 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 SAR1AQ9NR31 198 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 HPS5Q9UPZ3 1129 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 EIF3DO15371 548 aaKnown RBP eCLIP18.36■□□□□ 0.53
SYNE3-204ENST00000555759 LRRC74BQ6ZQY2 392 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 CDC42EP4Q9H3Q1 356 aaKnown RBP18.36■□□□□ 0.53
SYNE3-204ENST00000555759 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 LIN7AO14910 233 aaPredicted RBP18.36■□□□□ 0.53
SYNE3-204ENST00000555759 ALDH5A1P51649 535 aaPredicted RBP18.36■□□□□ 0.53
SYNE3-204ENST00000555759 OVGP1Q12889 678 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 CDC26Q8NHZ8 85 aa18.36■□□□□ 0.53
SYNE3-204ENST00000555759 CNDP1Q96KN2 507 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms