RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 PRMT6Q96LA8 375 aaPredicted RBP18.83■□□□□ 0.6
RCCD1-204ENST00000555737 SGK1O00141 431 aa18.83■□□□□ 0.6
RCCD1-204ENST00000555737 CYP1A2P05177 515 aa18.83■□□□□ 0.6
RCCD1-204ENST00000555737 PECAM1P16284 738 aaPredicted RBP18.83■□□□□ 0.6
RCCD1-204ENST00000555737 PDIA2Q13087 525 aaKnown RBP18.83■□□□□ 0.6
RCCD1-204ENST00000555737 RFWD3Q6PCD5 774 aa18.83■□□□□ 0.6
RCCD1-204ENST00000555737 LVRNQ6Q4G3 990 aa18.83■□□□□ 0.6
RCCD1-204ENST00000555737 TMEM270Q6UE05 265 aa18.83■□□□□ 0.6
RCCD1-204ENST00000555737 FAM13CQ8NE31 585 aa18.83■□□□□ 0.6
RCCD1-204ENST00000555737 PARD3BQ8TEW8 1205 aa18.83■□□□□ 0.6
RCCD1-204ENST00000555737 TMEM121Q9BTD3 319 aa18.83■□□□□ 0.6
RCCD1-204ENST00000555737 TXLNGQ9NUQ3 528 aa18.83■□□□□ 0.6
RCCD1-204ENST00000555737 CCPG1Q9ULG6 757 aa18.83■□□□□ 0.6
RCCD1-204ENST00000555737 MROH7Q68CQ1 1323 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 GZMAP12544 262 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 KRT4P19013 534 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 CYP1B1Q16678 543 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 PPP1R21Q6ZMI0 780 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 SPDYE1Q8NFV5 336 aaPredicted RBP18.82■□□□□ 0.6
RCCD1-204ENST00000555737 SHC3Q92529 594 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 RAB3IPQ96QF0 476 aaPredicted RBP18.82■□□□□ 0.6
RCCD1-204ENST00000555737 TMEM109Q9BVC6 243 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 KIAA1586Q9HCI6 787 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 SSTR1P30872 391 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 NRLP54845 237 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 SLC8A3P57103 927 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 SCYL3Q8IZE3 742 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 HELQQ8TDG4 1101 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 UVRAGQ9P2Y5 699 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 MAST2Q6P0Q8 1798 aa18.82■□□□□ 0.6
RCCD1-204ENST00000555737 MAPK13O15264 365 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 TLR3O15455 904 aaKnown RBP18.81■□□□□ 0.6
RCCD1-204ENST00000555737 ALDH3A1P30838 453 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 SMTNL2Q2TAL5 461 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 GRK7Q8WTQ7 553 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 C1orf112Q9NSG2 853 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 ZFP69BQ9UJL9 534 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 ADRA1DP25100 572 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 TUBP50607 506 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 POLGP54098 1239 aaPredicted RBP18.81■□□□□ 0.6
RCCD1-204ENST00000555737 RPL7AP62424 266 aaKnown RBP18.81■□□□□ 0.6
RCCD1-204ENST00000555737 MXRA7P84157 204 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 SPARCL1Q14515 664 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 SLC15A2Q16348 729 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 RHBDF2Q6PJF5 856 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 MCOLN2Q8IZK6 566 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 CCDC89Q8N998 374 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 COL20A1Q9P218 1284 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 STK24Q9Y6E0 443 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 COL14A1Q05707 1796 aaKnown RBP18.81■□□□□ 0.6
RCCD1-204ENST00000555737 ZBED4O75132 1171 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 ADRA2BP18089 450 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 CTCFP49711 727 aaPredicted RBP18.81■□□□□ 0.6
RCCD1-204ENST00000555737 SPP2Q13103 211 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 SMAD1Q15797 465 aaKnown RBP18.81■□□□□ 0.6
RCCD1-204ENST00000555737 TNFAIP8L3Q5GJ75 292 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 HHIPL2Q6UWX4 724 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 ARMC2Q8NEN0 867 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 ZCWPW1Q9H0M4 648 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 KMT5AQ9NQR1 393 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 PCDHB4Q9Y5E5 795 aa18.81■□□□□ 0.6
RCCD1-204ENST00000555737 SPDYE5A6NIY4 337 aa18.8■□□□□ 0.6
RCCD1-204ENST00000555737 SMIM24O75264 130 aa18.8■□□□□ 0.6
RCCD1-204ENST00000555737 KRT1P04264 644 aa18.8■□□□□ 0.6
RCCD1-204ENST00000555737 PTK6Q13882 451 aa18.8■□□□□ 0.6
RCCD1-204ENST00000555737 CLEC16AQ2KHT3 1053 aa18.8■□□□□ 0.6
RCCD1-204ENST00000555737 ASRGL1Q7L266 308 aa18.8■□□□□ 0.6
RCCD1-204ENST00000555737 SP8Q8IXZ3 490 aa18.8■□□□□ 0.6
RCCD1-204ENST00000555737 PRKAG3Q9UGI9 489 aa18.8■□□□□ 0.6
RCCD1-204ENST00000555737 DPPA5A6NC42 116 aa18.8■□□□□ 0.6
RCCD1-204ENST00000555737 ATP9AO75110 1047 aa18.8■□□□□ 0.6
RCCD1-204ENST00000555737 FGFR1P11362 822 aa18.8■□□□□ 0.6
RCCD1-204ENST00000555737 LRRD1A4D1F6 860 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 P4HBP07237 508 aaKnown RBP18.79■□□□□ 0.6
RCCD1-204ENST00000555737 FDX1P10109 184 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 QARSP47897 775 aaKnown RBP18.79■□□□□ 0.6
RCCD1-204ENST00000555737 SCARA3Q6AZY7 606 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 PRR11Q96HE9 360 aaPredicted RBP18.79■□□□□ 0.6
RCCD1-204ENST00000555737 FNBP1Q96RU3 617 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 DENND2DQ9H6A0 471 aaPredicted RBP18.79■□□□□ 0.6
RCCD1-204ENST00000555737 FBXO6Q9NRD1 293 aaPredicted RBP18.79■□□□□ 0.6
RCCD1-204ENST00000555737 DSG3P32926 999 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 BIRC2Q13490 618 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 KCNT1Q5JUK3 1230 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 TXNRD3NBQ6F5E7 133 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 DDX27Q96GQ7 796 aaKnown RBP18.79■□□□□ 0.6
RCCD1-204ENST00000555737 GMCL1Q96IK5 515 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 ANKFY1Q9P2R3 1169 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 USH1CQ9Y6N9 552 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 PTDSS1P48651 473 aaKnown RBP18.79■□□□□ 0.6
RCCD1-204ENST00000555737 AOC3Q16853 763 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 BBS9Q3SYG4 887 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 NLRP9Q7RTR0 991 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 MAB21L3Q8N8X9 362 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 RFWD2Q8NHY2 731 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 TTC17Q96AE7 1141 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 MXRA8Q9BRK3 442 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 MAK16Q9BXY0 300 aaKnown RBP18.79■□□□□ 0.6
RCCD1-204ENST00000555737 DLGAP2Q9P1A6 1054 aa18.79■□□□□ 0.6
RCCD1-204ENST00000555737 ARMCX1Q9P291 453 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms