RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	FMO1	Q01740	532 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	IFIT5	Q13325	482 aa	Known RBP	5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	CNGA2	Q16280	664 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	SPICE1	Q8N0Z3	855 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	ST8SIA2	Q92186	375 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	MYD88	Q99836	296 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	CHMP4A	Q9BY43	222 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	BTBD1	Q9H0C5	482 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	BRD9	Q9H8M2	597 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	SPON1	Q9HCB6	807 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	KIAA1586	Q9HCI6	787 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	STK32B	Q9NY57	414 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	JKAMP	Q9P055	326 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	ZDHHC8	Q9ULC8	765 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	DAAM1	Q9Y4D1	1078 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	SLC30A1	Q9Y6M5	507 aa		5.78	□□□□□ -1.48
KTN1-223	ENST00000555573	CDHR4	A6H8M9	788 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	GPR42	O15529	346 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	PRICKLE3	O43900	615 aa	Predicted RBP	5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	ALAS1	P13196	640 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	ARFIP2	P53365	341 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	SUMO3	P55854	103 aa	Predicted RBP	5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	KIF22	Q14807	665 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	XRRA1	Q6P2D8	792 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	ZNF365	Q70YC5	407 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	LIMS2	Q7Z4I7	341 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	D2HGDH	Q8N465	521 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	MB21D1	Q8N884	522 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	PCSK9	Q8NBP7	692 aa	Known RBP	5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	MDGA1	Q8NFP4	955 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	ZFP28	Q8NHY6	868 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	TRIM54	Q9BYV2	358 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	ZCCHC4	Q9H5U6	513 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	ZNF287	Q9HBT7	754 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	NLRC4	Q9NPP4	1024 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	FAM30A	Q9NZY2	134 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	OGDHL	Q9ULD0	1010 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	ZFR2	Q9UPR6	939 aa	Known RBP	5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	SNX13	Q9Y5W8	968 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	ISM1	B1AKI9	464 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	HK1	P19367	917 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	EN2	P19622	333 aa	Predicted RBP	5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	CASP5	P51878	434 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	PSMC1	P62191	440 aa	Known RBP	5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	UTP14C	Q5TAP6	766 aa	Known RBP	5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	EFCAB12	Q6NXP0	572 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	TOGARAM2	Q6ZUX3	1019 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	SESTD1	Q86VW0	696 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	SKAP1	Q86WV1	359 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	FAM186B	Q8IYM0	893 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	OR52N2	Q8NGI0	321 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	PGBD4	Q96DM1	585 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	CCDC138	Q96M89	665 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	MPHOSPH9	Q99550	1183 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	CFAP97	Q9P2B7	532 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	MED16	Q9Y2X0	877 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	RIPOR2	Q9Y4F9	1068 aa		5.77	□□□□□ -1.49
KTN1-223	ENST00000555573	RASA4B	C9J798	803 aa		5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	RASA4	O43374	803 aa		5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	MFAP3L	O75121	409 aa		5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	IPO13	O94829	963 aa	Known RBP	5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	ITGB1	P05556	798 aa		5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	RARB	P10826	455 aa		5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	ZKSCAN1	P17029	563 aa	Predicted RBP	5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	KCNJ5	P48544	419 aa		5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	MORC3	Q14149	939 aa		5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	UBXN11	Q5T124	520 aa		5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	C10orf62	Q5T681	223 aa	Predicted RBP	5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	SIAH1	Q8IUQ4	282 aa		5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	KBTBD7	Q8WVZ9	684 aa		5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	SSBP3	Q9BWW4	388 aa	Predicted RBP	5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	RLIM	Q9NVW2	624 aa		5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	POGK	Q9P215	609 aa		5.76	□□□□□ -1.49
KTN1-223	ENST00000555573	ZNF785	A8K8V0	405 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573		F8W8V4	182 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	AGFG2	O95081	481 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	PRSS23	O95084	383 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	RPL17	P18621	184 aa	Known RBP	5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	ZNF543	Q08ER8	600 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	VPS72	Q15906	364 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	ZFYVE27	Q5T4F4	411 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	C1QL3	Q5VWW1	255 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	MED25	Q71SY5	747 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	CIR1	Q86X95	450 aa	Predicted RBP	5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	TMIE	Q8NEW7	156 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	OR10H5	Q8NGA6	315 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	TBC1D15	Q8TC07	691 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	MORC4	Q8TE76	937 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	PHACTR3	Q96KR7	559 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	SGCZ	Q96LD1	299 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	RIPOR3	Q96MK2	946 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	ARPC5L	Q9BPX5	153 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	PARD6A	Q9NPB6	346 aa		5.75	□□□□□ -1.49
KTN1-223	ENST00000555573	SACM1L	Q9NTJ5	587 aa		5.75	□□□□□ -1.49

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