RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 SLITRK3O94933 977 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 PRKCBP05771 671 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 MYL4P12829 197 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 CPA1P15085 419 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 BRCC3P46736 316 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 EPHA5P54756 1037 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 ARPP19P56211 112 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 KRT32Q14532 448 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 PON2Q15165 354 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 TEAD2Q15562 447 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 NPY5RQ15761 445 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 UPP1Q16831 310 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 GLRA4Q5JXX5 417 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 SH3PXD2AQ5TCZ1 1133 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 NCAPH2Q6IBW4 605 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 Q6ZUG5 572 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 NOSTRINQ8IVI9 506 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 TPH2Q8IWU9 490 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 ELMOD1Q8N336 334 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 LEMD2Q8NC56 503 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 FAM200AQ8TCP9 573 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 HAS1Q92839 578 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 ZC3H10Q96K80 434 aaKnown RBP10.64□□□□□ -0.71
SCFD1-215ENST00000555259 SCNM1Q9BWG6 230 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 FZD8Q9H461 694 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 PDZD7Q9H5P4 517 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 PRMT7Q9NVM4 692 aaPredicted RBP10.64□□□□□ -0.71
SCFD1-215ENST00000555259 CEP72Q9P209 647 aa10.64□□□□□ -0.71
SCFD1-215ENST00000555259 FLNBO75369 2602 aaKnown RBP10.64□□□□□ -0.71
SCFD1-215ENST00000555259 LRRIQ4A6NIV6 560 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 N4BP3O15049 544 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 TWF1Q12792 350 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 DAB2IPQ5VWQ8 1189 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 PPP4R3AQ6IN85 833 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 PKN3Q6P5Z2 889 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 DAGLBQ8NCG7 672 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 TTC8Q8TAM2 541 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 ZNF512Q96ME7 567 aaPredicted RBP10.63□□□□□ -0.71
SCFD1-215ENST00000555259 UROC1Q96N76 676 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 PPP1R10Q96QC0 940 aaKnown RBP10.63□□□□□ -0.71
SCFD1-215ENST00000555259 GPR88Q9GZN0 384 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 POLR3FQ9H1D9 316 aaPredicted RBP10.63□□□□□ -0.71
SCFD1-215ENST00000555259 SLITRK6Q9H5Y7 841 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 GOLGA2P5Q9HBQ8 144 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 ASAH2Q9NR71 780 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 GTSE1Q9NYZ3 720 aa10.63□□□□□ -0.71
SCFD1-215ENST00000555259 TAF4O00268 1085 aa10.62□□□□□ -0.71
SCFD1-215ENST00000555259 CEACAM1P13688 526 aa10.62□□□□□ -0.71
SCFD1-215ENST00000555259 FAM187BQ17R55 369 aa10.62□□□□□ -0.71
SCFD1-215ENST00000555259 PLK5Q496M5 336 aa10.62□□□□□ -0.71
SCFD1-215ENST00000555259 TPGS2Q68CL5 300 aa10.62□□□□□ -0.71
SCFD1-215ENST00000555259 CDCA2Q69YH5 1023 aaPredicted RBP10.62□□□□□ -0.71
SCFD1-215ENST00000555259 SHKBP1Q8TBC3 707 aa10.62□□□□□ -0.71
SCFD1-215ENST00000555259 ZFYVE19Q96K21 471 aa10.62□□□□□ -0.71
SCFD1-215ENST00000555259 NCOA5Q9HCD5 579 aaKnown RBP10.62□□□□□ -0.71
SCFD1-215ENST00000555259 GPRC5CQ9NQ84 441 aa10.62□□□□□ -0.71
SCFD1-215ENST00000555259 ANKEF1Q9NU02 776 aa10.62□□□□□ -0.71
SCFD1-215ENST00000555259 GDAQ9Y2T3 454 aa10.62□□□□□ -0.71
SCFD1-215ENST00000555259 LNP1A1A4G5 178 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 LYPLA2O95372 231 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 GCFC2P16383 781 aaKnown RBP10.61□□□□□ -0.71
SCFD1-215ENST00000555259 RARRES1P49788 294 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 CCT2P78371 535 aaKnown RBP10.61□□□□□ -0.71
SCFD1-215ENST00000555259 PRPF4BQ13523 1007 aaKnown RBP10.61□□□□□ -0.71
SCFD1-215ENST00000555259 MRPL58Q14197 206 aaKnown RBP10.61□□□□□ -0.71
SCFD1-215ENST00000555259 TMEM132AQ24JP5 1023 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 GALNT17Q6IS24 598 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 KRT25Q7Z3Z0 450 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 NEK8Q86SG6 692 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 GPIHBP1Q8IV16 184 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 TRIM22Q8IYM9 498 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 CCDC43Q96MW1 224 aaKnown RBP10.61□□□□□ -0.71
SCFD1-215ENST00000555259 LRRC3BQ96PB8 259 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 ADPGKQ9BRR6 497 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 DUSP15Q9H1R2 295 aaPredicted RBP10.61□□□□□ -0.71
SCFD1-215ENST00000555259 FBXL5Q9UKA1 691 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 USP20Q9Y2K6 914 aa10.61□□□□□ -0.71
SCFD1-215ENST00000555259 A0A1W2PRU2 124 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 H7C4K7 107 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 SYN3O14994 580 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 MARCH6O60337 910 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 CCNT1O60563 726 aaKnown RBP10.6□□□□□ -0.71
SCFD1-215ENST00000555259 CAVIN2O95810 425 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 CSRP1P21291 193 aaKnown RBP10.6□□□□□ -0.71
SCFD1-215ENST00000555259 CREB5Q02930 508 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 SOX4Q06945 474 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-215ENST00000555259 TNK2Q07912 1038 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 MAPK6Q16659 721 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 ARHGAP29Q52LW3 1261 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 EEF1DP3Q658K8 133 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 MAEAQ7L5Y9 396 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 ARID3BQ8IVW6 561 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-215ENST00000555259 ZBTB8OSQ8IWT0 167 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 FBXL16Q8N461 479 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 HSD17B14Q9BPX1 270 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 EIF2AK1Q9BQI3 630 aaKnown RBP10.6□□□□□ -0.71
SCFD1-215ENST00000555259 AGXT2Q9BYV1 514 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 AFF4Q9UHB7 1163 aaKnown RBP10.6□□□□□ -0.71
SCFD1-215ENST00000555259 SLC8A2Q9UPR5 921 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 EML5Q05BV3 1969 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms