RNA–Protein interactions for RNA: ENST00000555088.5

GSKIP-204, Transcript of GSK3B interacting protein, humanhuman

TSL 5

Gene GSKIP, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-204ENST00000555088 FAXDC2Q96IV6 333 aa13.56□□□□□ -0.24
GSKIP-204ENST00000555088 SAMD11Q96NU1 681 aa13.56□□□□□ -0.24
GSKIP-204ENST00000555088 COLEC11Q9BWP8 271 aa13.56□□□□□ -0.24
GSKIP-204ENST00000555088 MTMR12Q9C0I1 747 aa13.56□□□□□ -0.24
GSKIP-204ENST00000555088 NDST4Q9H3R1 872 aa13.56□□□□□ -0.24
GSKIP-204ENST00000555088 RYDENQ9NUL5 291 aaKnown RBP13.56□□□□□ -0.24
GSKIP-204ENST00000555088 TUBGCP4Q9UGJ1 667 aa13.56□□□□□ -0.24
GSKIP-204ENST00000555088 R3HCC1Q9Y3T6 440 aaKnown RBP13.56□□□□□ -0.24
GSKIP-204ENST00000555088 DDHD2O94830 711 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 ALDH2P05091 517 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 ATP1A3P13637 1013 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 PPM1AP35813 382 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 GCLMP48507 274 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 ALDH7A1P49419 539 aaKnown RBP13.55□□□□□ -0.24
GSKIP-204ENST00000555088 COPB1P53618 953 aaKnown RBP13.55□□□□□ -0.24
GSKIP-204ENST00000555088 BIRC3Q13489 604 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 UPP1Q16831 310 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 UVSSAQ2YD98 709 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 LRIT3Q3SXY7 679 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 MIIPQ5JXC2 388 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 TDRD10Q5VZ19 366 aaKnown RBP13.55□□□□□ -0.24
GSKIP-204ENST00000555088 C9orf57Q5W0N0 161 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 ZNF280BQ86YH2 543 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 RNF214Q8ND24 703 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 FBXL13Q8NEE6 735 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 ZNF560Q96MR9 790 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 ZNF558Q96NG5 402 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 PLVAPQ9BX97 442 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 RBSNQ9H1K0 784 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 CWH43Q9H720 699 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 NRDE2Q9H7Z3 1164 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 VRTNQ9H8Y1 702 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 SIX4Q9UIU6 781 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 MSRAQ9UJ68 235 aa13.55□□□□□ -0.24
GSKIP-204ENST00000555088 MRPL42Q9Y6G3 142 aaKnown RBP13.55□□□□□ -0.24
GSKIP-204ENST00000555088 LGALS16A8MUM7 142 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 PODXLO00592 558 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 ZC3H11AO75152 810 aaKnown RBP eCLIP13.54□□□□□ -0.24
GSKIP-204ENST00000555088 PHACTR2O75167 634 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 SLC34A2O95436 690 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 ITGB3P05106 788 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 GALTP07902 379 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 MYL7Q01449 175 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 MYO1EQ12965 1108 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 TRPC3Q13507 836 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 NCOA4Q13772 614 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 SGSM1Q2NKQ1 1148 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 FILIP1LQ4L180 1135 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 PAN2Q504Q3 1202 aaKnown RBP13.54□□□□□ -0.24
GSKIP-204ENST00000555088 HSP90AA4PQ58FG1 418 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 CREBRFQ8IUR6 639 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 FAM124BQ9H5Z6 455 aaPredicted RBP13.54□□□□□ -0.24
GSKIP-204ENST00000555088 PCDHB12Q9Y5F1 795 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 PCDHGA4Q9Y5G9 962 aa13.54□□□□□ -0.24
GSKIP-204ENST00000555088 TNRC18O15417 2968 aaPredicted RBP13.53□□□□□ -0.24
GSKIP-204ENST00000555088 A0A1B0GTH6 734 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 ARHGEF37A1IGU5 675 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 CASTOR2A6NHX0 329 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 NRP1O14786 923 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 TRAPPC3O43617 180 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 B4GALT3O60512 393 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 ASS1P00966 412 aaKnown RBP13.53□□□□□ -0.24
GSKIP-204ENST00000555088 SERPINC1P01008 464 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 RB1P06400 928 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 TPM3P06753 285 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 FAM163BP0C2L3 166 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 LINC00271P0C7V0 271 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 POLR2BP30876 1174 aaKnown RBP13.53□□□□□ -0.24
GSKIP-204ENST00000555088 SLC11A1P49279 550 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 AARSP49588 968 aaKnown RBP eCLIP13.53□□□□□ -0.24
GSKIP-204ENST00000555088 CLCNKBP51801 687 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 BCAR1P56945 870 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 ELAVL2Q12926 359 aaKnown RBP13.53□□□□□ -0.24
GSKIP-204ENST00000555088 SV2CQ496J9 727 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 CBWD6Q4V339 395 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 EPC2Q52LR7 807 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 CBWD3Q5JTY5 395 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 CBWD5Q5RIA9 395 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 FKBP15Q5T1M5 1219 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 LMBRD2Q68DH5 695 aaPredicted RBP13.53□□□□□ -0.24
GSKIP-204ENST00000555088 FAM109BQ6ICB4 259 aaPredicted RBP13.53□□□□□ -0.24
GSKIP-204ENST00000555088 SARM1Q6SZW1 724 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 KCNT2Q6UVM3 1135 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 CCDC150Q8NCX0 1101 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 TAS1R2Q8TE23 839 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 IMPG2Q9BZV3 1241 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 XYLT2Q9H1B5 865 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 RAB20Q9NX57 234 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 GDAP2Q9NXN4 497 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 TAB2Q9NYJ8 693 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 DNAJB4Q9UDY4 337 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 AGAP1Q9UPQ3 857 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 FAN1Q9Y2M0 1017 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 DAAM1Q9Y4D1 1078 aa13.53□□□□□ -0.24
GSKIP-204ENST00000555088 LINC01553A4QN01 128 aa13.52□□□□□ -0.25
GSKIP-204ENST00000555088 C5orf67F2Z3F1 127 aa13.52□□□□□ -0.25
GSKIP-204ENST00000555088 CBFA2T2O43439 604 aa13.52□□□□□ -0.25
GSKIP-204ENST00000555088 VNN1O95497 513 aa13.52□□□□□ -0.25
GSKIP-204ENST00000555088 HLA-DRAP01903 254 aa13.52□□□□□ -0.25
GSKIP-204ENST00000555088 KRT19P08727 400 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms