RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TUBB6Q9BUF5 446 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 GCNT4Q9P109 453 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 ITGB1BP2Q9UKP3 347 aa16.59■□□□□ 0.25
SYNE3-203ENST00000554873 OPHN1O60890 802 aa16.58■□□□□ 0.25
SYNE3-203ENST00000554873 RNASEH1O60930 286 aaKnown RBP16.58■□□□□ 0.25
SYNE3-203ENST00000554873 CTC1Q2NKJ3 1217 aa16.58■□□□□ 0.25
SYNE3-203ENST00000554873 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.25
SYNE3-203ENST00000554873 ACAD11Q709F0 780 aa16.58■□□□□ 0.25
SYNE3-203ENST00000554873 CYFIP1Q7L576 1253 aa16.58■□□□□ 0.25
SYNE3-203ENST00000554873 PDCD7Q8N8D1 485 aaKnown RBP16.58■□□□□ 0.25
SYNE3-203ENST00000554873 MCUR1Q96AQ8 359 aa16.58■□□□□ 0.25
SYNE3-203ENST00000554873 OSGEPQ9NPF4 335 aa16.58■□□□□ 0.25
SYNE3-203ENST00000554873 PCDHB13Q9Y5F0 798 aa16.58■□□□□ 0.25
SYNE3-203ENST00000554873 ASTN1O14525 1302 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 MEIS2O14770 477 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 RPA1P27694 616 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 CRABP2P29373 138 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 WDR4P57081 412 aaKnown RBP16.58■□□□□ 0.24
SYNE3-203ENST00000554873 ARHGAP4P98171 946 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 SYDE2Q5VT97 1194 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 CLNKQ7Z7G1 428 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 OLIG1Q8TAK6 271 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 LNX1Q8TBB1 728 aaPredicted RBP16.58■□□□□ 0.24
SYNE3-203ENST00000554873 DIS3LQ8TF46 1054 aaKnown RBP16.58■□□□□ 0.24
SYNE3-203ENST00000554873 FNBP1Q96RU3 617 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 TYW1Q9NV66 732 aaKnown RBP16.58■□□□□ 0.24
SYNE3-203ENST00000554873 CLIC5Q9NZA1 410 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 LGALS13Q9UHV8 139 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 PPP1R9AQ9ULJ8 1098 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 TMEM98Q9Y2Y6 226 aa16.58■□□□□ 0.24
SYNE3-203ENST00000554873 FAM47DPA6NHR8 397 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 GYG2O15488 501 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 EDF1O60869 148 aaKnown RBP16.57■□□□□ 0.24
SYNE3-203ENST00000554873 TCEA3O75764 348 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 PIM1P11309 404 aaPredicted RBP16.57■□□□□ 0.24
SYNE3-203ENST00000554873 ALAS1P13196 640 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 ALOX15P16050 662 aaPredicted RBP16.57■□□□□ 0.24
SYNE3-203ENST00000554873 TRAPPC3LQ5T215 181 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 NLRP9Q7RTR0 991 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 SRRM1Q8IYB3 904 aaKnown RBP16.57■□□□□ 0.24
SYNE3-203ENST00000554873 ANKRD35Q8N283 1001 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 SLC30A5Q8TAD4 765 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 SPIRE2Q8WWL2 714 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 CRYGNQ8WXF5 182 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 MXD3Q9BW11 206 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 GLT8D2Q9H1C3 349 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 IKZF4Q9H2S9 585 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 C2CD2LO14523 706 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 ZNF211Q13398 564 aaPredicted RBP16.57■□□□□ 0.24
SYNE3-203ENST00000554873 B3GNT6Q6ZMB0 384 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 VPS52Q8N1B4 723 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 DNAJC1Q96KC8 554 aaKnown RBP16.57■□□□□ 0.24
SYNE3-203ENST00000554873 MPHOSPH6Q99547 160 aaKnown RBP16.57■□□□□ 0.24
SYNE3-203ENST00000554873 TIMMDC1Q9NPL8 285 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 TBCCD1Q9NVR7 557 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 BTBD7Q9P203 1132 aa16.57■□□□□ 0.24
SYNE3-203ENST00000554873 C6orf229H3BNL8 230 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 MUTP22033 750 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 GRIA2P42262 883 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 PPP2R5CQ13362 524 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 BMT2Q1RMZ1 405 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 SATL1Q86VE3 508 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 CYP4X1Q8N118 509 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 ERMNQ8TAM6 284 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 SLC35G2Q8TBE7 412 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 POLR3CQ9BUI4 534 aaPredicted RBP16.56■□□□□ 0.24
SYNE3-203ENST00000554873 SLCO1B3Q9NPD5 702 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 AHDC1Q5TGY3 1603 aaPredicted RBP16.56■□□□□ 0.24
SYNE3-203ENST00000554873 FOCADQ5VW36 1801 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 SFI1A8K8P3 1242 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 SLC16A3O15427 465 aaKnown RBP16.56■□□□□ 0.24
SYNE3-203ENST00000554873 GCNT3O95395 438 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 POLD1P28340 1107 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 STAT1P42224 750 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 CYP4A11Q02928 519 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 THOC5Q13769 683 aaKnown RBP16.56■□□□□ 0.24
SYNE3-203ENST00000554873 MFSD4BQ5TF39 518 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 RINLQ6ZS11 566 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 MTDHQ86UE4 582 aaKnown RBP16.56■□□□□ 0.24
SYNE3-203ENST00000554873 GLYCTKQ8IVS8 523 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 PRELID2Q8N945 189 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 LENG9Q96B70 501 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 SIKE1Q9BRV8 207 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 RUSC1Q9BVN2 902 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 BHMT2Q9H2M3 363 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 INIPQ9NRY2 104 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 ZNF148Q9UQR1 794 aa16.56■□□□□ 0.24
SYNE3-203ENST00000554873 BIRC5O15392 142 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 VCAM1P19320 739 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 DCTN2Q13561 401 aaKnown RBP16.55■□□□□ 0.24
SYNE3-203ENST00000554873 GRM2Q14416 872 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 CRY2Q49AN0 593 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 MOXD1Q6UVY6 613 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 SPOCK2Q92563 424 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 ARHGEF38Q9NXL2 777 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 KIF13BQ9NQT8 1826 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 FAM170AA1A519 330 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 GTPBP10A4D1E9 387 aaKnown RBP16.55■□□□□ 0.24
SYNE3-203ENST00000554873 TRIM43BA6NCK2 446 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 FAM86B1E9PN63 330 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms