RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 RHBDL3P58872 404 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 ZNF280AP59817 542 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-213ENST00000554776 RAP2BP61225 183 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 FHL2Q14192 279 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 PDCD4Q53EL6 469 aaKnown RBP3.97□□□□□ -1.77
SCFD1-213ENST00000554776 ATAT1Q5SQI0 421 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 AGAP9Q5VTM2 703 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 IL31Q6EBC2 164 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 ZNF529Q6P280 563 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 TTC7BQ86TV6 843 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 RHOT2Q8IXI1 618 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 ULK2Q8IYT8 1036 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 SYNE4Q8N205 404 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 CAMKK1Q8N5S9 505 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 NEU4Q8WWR8 484 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-213ENST00000554776 RUNDC1Q96C34 613 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 MVB12AQ96EY5 273 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 MYEOVQ96EZ4 313 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 TEX101Q9BY14 249 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 C11orf54Q9H0W9 315 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-213ENST00000554776 AKIP1Q9NQ31 210 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 FBXO34Q9NWN3 711 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 CALCOCO1Q9P1Z2 691 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 DKK2Q9UBU2 259 aa3.97□□□□□ -1.77
SCFD1-213ENST00000554776 TMEM200CA6NKL6 621 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 MARCH11A6NNE9 402 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 APAF1O14727 1248 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 RPLP2P05387 115 aaKnown RBP3.96□□□□□ -1.78
SCFD1-213ENST00000554776 CD1AP06126 327 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 SBK3P0C264 359 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 SPATA31D3P0C874 917 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 U2AF1L5P0DN76 240 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-213ENST00000554776 LAG3P18627 525 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 SLC6A4P31645 630 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 NEK3P51956 506 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 U2AF1Q01081 240 aaKnown RBP eCLIP3.96□□□□□ -1.78
SCFD1-213ENST00000554776 UBE4AQ14139 1066 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 UBXN2BQ14CS0 331 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 PGS1Q32NB8 556 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 BEAN1Q3B7T3 259 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 TIGD2Q4W5G0 525 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 COBLL1Q53SF7 1204 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 CCSAPQ6IQ19 270 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-213ENST00000554776 Q6ZPA2 131 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 SPATA31D4Q6ZUB0 917 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 MED25Q71SY5 747 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 ZNF627Q7L945 461 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 UBE3BQ7Z3V4 1068 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 COL23A1Q86Y22 540 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-213ENST00000554776 LDLRAD3Q86YD5 345 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 DIS3LQ8TF46 1054 aaKnown RBP3.96□□□□□ -1.78
SCFD1-213ENST00000554776 RGMAQ96B86 450 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 MPHOSPH6Q99547 160 aaKnown RBP3.96□□□□□ -1.78
SCFD1-213ENST00000554776 MAP3K14Q99558 947 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 PRRX2Q99811 253 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 MLST8Q9BVC4 326 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 MRIQ9BWK5 157 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 PRDM11Q9NQV5 511 aa3.96□□□□□ -1.78
SCFD1-213ENST00000554776 USP15Q9Y4E8 981 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-213ENST00000554776 CENPVL1A0A0U1RR11 272 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 TCRBV7S2A1N4TA0A589 114 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 NT5C1B-RDH14C9J2C7 533 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 GRM6O15303 877 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 SLC16A6O15403 523 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 PLIN1O60240 522 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 ABHD16AO95870 558 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 ALDH2P05091 517 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 ALAS1P13196 640 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 KRT4P19013 534 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 MALP21145 153 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 GCSHP23434 173 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 SLC6A2P23975 617 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 BMPR1AP36894 532 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 MAP2K6P52564 334 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 USP14P54578 494 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 CREMQ03060 361 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 DPTQ07507 201 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 NOGQ13253 232 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 SNAPC2Q13487 334 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 GBX1Q14549 363 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 KHDC1Q4VXA5 237 aaKnown RBP3.95□□□□□ -1.78
SCFD1-213ENST00000554776 PABPC1LQ4VXU2 614 aaKnown RBP3.95□□□□□ -1.78
SCFD1-213ENST00000554776 LY6G5CQ5SRR4 150 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 KCNV1Q6PIU1 500 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 GADL1Q6ZQY3 521 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 OVCH2Q7RTZ1 564 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 OR56A1Q8NGH5 318 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 PROKR1Q8TCW9 393 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 PHACTR3Q96KR7 559 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 VRK1Q99986 396 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-213ENST00000554776 KLHL11Q9NVR0 708 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 ATP11BQ9Y2G3 1177 aa3.95□□□□□ -1.78
SCFD1-213ENST00000554776 F2RL2O00254 374 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 ERC2O15083 957 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 KIAA0391O15091 583 aaKnown RBP3.94□□□□□ -1.78
SCFD1-213ENST00000554776 LPXNO60711 386 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 HAUS5O94927 633 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 PRSS23O95084 383 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 NDUFA10O95299 355 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 FTLP02792 175 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms