RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 TSSK4Q6SA08 328 aa26.49■■□□□ 1.83
FOXA1-204ENST00000554607 C4orf32Q8N8J7 132 aa26.49■■□□□ 1.83
FOXA1-204ENST00000554607 SNX29Q8TEQ0 813 aa26.49■■□□□ 1.83
FOXA1-204ENST00000554607 TCEAL4Q96EI5 215 aa26.49■■□□□ 1.83
FOXA1-204ENST00000554607 SUSD3Q96L08 255 aa26.49■■□□□ 1.83
FOXA1-204ENST00000554607 ASB16Q96NS5 453 aa26.49■■□□□ 1.83
FOXA1-204ENST00000554607 LLPHQ9BRT6 129 aaKnown RBP26.49■■□□□ 1.83
FOXA1-204ENST00000554607 TARS2Q9BW92 718 aaKnown RBP26.49■■□□□ 1.83
FOXA1-204ENST00000554607 C17orf75Q9HAS0 396 aa26.49■■□□□ 1.83
FOXA1-204ENST00000554607 ARHGAP28Q9P2N2 729 aa26.49■■□□□ 1.83
FOXA1-204ENST00000554607 AFF4Q9UHB7 1163 aaKnown RBP26.49■■□□□ 1.83
FOXA1-204ENST00000554607 SHISA7A6NL88 538 aa26.48■■□□□ 1.83
FOXA1-204ENST00000554607 PSMC3P17980 439 aa26.48■■□□□ 1.83
FOXA1-204ENST00000554607 PROZP22891 400 aa26.48■■□□□ 1.83
FOXA1-204ENST00000554607 LMNB2Q03252 620 aa26.48■■□□□ 1.83
FOXA1-204ENST00000554607 ZNF280DQ6N043 979 aa26.48■■□□□ 1.83
FOXA1-204ENST00000554607 MPZL3Q6UWV2 235 aa26.48■■□□□ 1.83
FOXA1-204ENST00000554607 FBXO18Q8NFZ0 1043 aa26.48■■□□□ 1.83
FOXA1-204ENST00000554607 DEPDC1BQ8WUY9 529 aa26.48■■□□□ 1.83
FOXA1-204ENST00000554607 SMARCD2Q92925 531 aa26.48■■□□□ 1.83
FOXA1-204ENST00000554607 CHRDQ9H2X0 955 aa26.48■■□□□ 1.83
FOXA1-204ENST00000554607 KCNG1Q9UIX4 513 aa26.48■■□□□ 1.83
FOXA1-204ENST00000554607 NDRG2Q9UN36 371 aaKnown RBP26.48■■□□□ 1.83
FOXA1-204ENST00000554607 LIMCH1Q9UPQ0 1083 aa26.48■■□□□ 1.83
FOXA1-204ENST00000554607 HIP1RO75146 1068 aa26.47■■□□□ 1.83
FOXA1-204ENST00000554607 MCM4P33991 863 aa26.47■■□□□ 1.83
FOXA1-204ENST00000554607 MAP4K3Q8IVH8 894 aa26.47■■□□□ 1.83
FOXA1-204ENST00000554607 ZNF334Q9HCZ1 680 aaPredicted RBP26.47■■□□□ 1.83
FOXA1-204ENST00000554607 GMEB2Q9UKD1 530 aa26.47■■□□□ 1.83
FOXA1-204ENST00000554607 F5P12259 2224 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 MARCKSP29966 332 aaPredicted RBP26.46■■□□□ 1.83
FOXA1-204ENST00000554607 GDI1P31150 447 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 CCR2P41597 374 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 KRT79Q5XKE5 535 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 TAS1R3Q7RTX0 852 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 DAW1Q8N136 415 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 ZNF687Q8N1G0 1237 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 IGSF22Q8N9C0 903 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 FAM3CQ92520 227 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 DDX12PQ92771 950 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 C18orf25Q96B23 403 aaPredicted RBP26.46■■□□□ 1.83
FOXA1-204ENST00000554607 GPR88Q9GZN0 384 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 ASAH2Q9NR71 780 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 RAB23Q9ULC3 237 aa26.46■■□□□ 1.83
FOXA1-204ENST00000554607 E9PMD0 336 aa26.45■■□□□ 1.82
FOXA1-204ENST00000554607 HMGN5P82970 282 aaKnown RBP26.45■■□□□ 1.82
FOXA1-204ENST00000554607 TWF1Q12792 350 aa26.45■■□□□ 1.82
FOXA1-204ENST00000554607 STRN3Q13033 797 aa26.45■■□□□ 1.82
FOXA1-204ENST00000554607 VITQ6UXI7 678 aa26.45■■□□□ 1.82
FOXA1-204ENST00000554607 CCDC83Q8IWF9 413 aa26.45■■□□□ 1.82
FOXA1-204ENST00000554607 E2F7Q96AV8 911 aa26.45■■□□□ 1.82
FOXA1-204ENST00000554607 TBC1D32Q96NH3 1257 aa26.45■■□□□ 1.82
FOXA1-204ENST00000554607 TIPINQ9BVW5 301 aa26.45■■□□□ 1.82
FOXA1-204ENST00000554607 LMAN1LQ9HAT1 526 aa26.45■■□□□ 1.82
FOXA1-204ENST00000554607 TRPV4Q9HBA0 871 aa26.45■■□□□ 1.82
FOXA1-204ENST00000554607 CDV3Q9UKY7 258 aaKnown RBP26.45■■□□□ 1.82
FOXA1-204ENST00000554607 PCDHB8Q9UN66 801 aa26.45■■□□□ 1.82
FOXA1-204ENST00000554607 NCOR2Q9Y618 2525 aa26.45■■□□□ 1.82
FOXA1-204ENST00000554607 CITO14578 2027 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 ABLIM1O14639 778 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 ZNF263O14978 683 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 MYL4P12829 197 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 CCR3P51677 355 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 ATXN1P54253 815 aaKnown RBP26.44■■□□□ 1.82
FOXA1-204ENST00000554607 EPHA5P54756 1037 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 PTGDRQ13258 359 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 RINT1Q6NUQ1 792 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 HS6ST3Q8IZP7 471 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 CELF5Q8N6W0 485 aaKnown RBP26.44■■□□□ 1.82
FOXA1-204ENST00000554607 FAM184AQ8NB25 1140 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 ZSWIM3Q96MP5 696 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 NTPCRQ9BSD7 190 aaKnown RBP26.44■■□□□ 1.82
FOXA1-204ENST00000554607 OXCT2Q9BYC2 517 aaPredicted RBP26.44■■□□□ 1.82
FOXA1-204ENST00000554607 CEP72Q9P209 647 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 USP18Q9UMW8 372 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.44■■□□□ 1.82
FOXA1-204ENST00000554607 PIAS3Q9Y6X2 628 aa26.44■■□□□ 1.82
FOXA1-204ENST00000554607 TOM1L1O75674 476 aa26.43■■□□□ 1.82
FOXA1-204ENST00000554607 HARSP12081 509 aaKnown RBP26.43■■□□□ 1.82
FOXA1-204ENST00000554607 CPB1P15086 417 aa26.43■■□□□ 1.82
FOXA1-204ENST00000554607 MLLT6P55198 1093 aaPredicted RBP26.43■■□□□ 1.82
FOXA1-204ENST00000554607 C1orf186Q6ZWK4 172 aa26.43■■□□□ 1.82
FOXA1-204ENST00000554607 MFSD6LQ8IWD5 586 aa26.43■■□□□ 1.82
FOXA1-204ENST00000554607 LAD1O00515 517 aa26.42■■□□□ 1.82
FOXA1-204ENST00000554607 SLC16A4O15374 487 aa26.42■■□□□ 1.82
FOXA1-204ENST00000554607 MOSPD3O75425 235 aa26.42■■□□□ 1.82
FOXA1-204ENST00000554607 TDGF1P13385 188 aa26.42■■□□□ 1.82
FOXA1-204ENST00000554607 SMTNP53814 917 aa26.42■■□□□ 1.82
FOXA1-204ENST00000554607 NBR1Q14596 966 aa26.42■■□□□ 1.82
FOXA1-204ENST00000554607 NOLC1Q14978 699 aaKnown RBP eCLIP26.42■■□□□ 1.82
FOXA1-204ENST00000554607 SLC10A6Q3KNW5 377 aa26.42■■□□□ 1.82
FOXA1-204ENST00000554607 C1orf228Q6PIY5 440 aa26.42■■□□□ 1.82
FOXA1-204ENST00000554607 ZSCAN18Q8TBC5 510 aaPredicted RBP26.42■■□□□ 1.82
FOXA1-204ENST00000554607 MSANTD3Q96H12 275 aa26.42■■□□□ 1.82
FOXA1-204ENST00000554607 RTKNQ9BST9 563 aa26.42■■□□□ 1.82
FOXA1-204ENST00000554607 RUSC1Q9BVN2 902 aa26.42■■□□□ 1.82
FOXA1-204ENST00000554607 VIPR2P41587 438 aa26.41■■□□□ 1.82
FOXA1-204ENST00000554607 YWHAHQ04917 246 aaPredicted RBP26.41■■□□□ 1.82
FOXA1-204ENST00000554607 MAPK7Q13164 816 aa26.41■■□□□ 1.82
FOXA1-204ENST00000554607 PLD1Q13393 1074 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms