RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 LMBRD1Q9NUN5 540 aa5.41□□□□□ -1.54
PPP4R3A-204ENST00000554574 RAI14Q9P0K7 980 aa5.41□□□□□ -1.54
PPP4R3A-204ENST00000554574 ABCF2Q9UG63 623 aa5.41□□□□□ -1.54
PPP4R3A-204ENST00000554574 SERPINB13Q9UIV8 391 aa5.41□□□□□ -1.54
PPP4R3A-204ENST00000554574 SALL1Q9NSC2 1324 aa5.41□□□□□ -1.54
PPP4R3A-204ENST00000554574 DDX60LQ5H9U9 1706 aaKnown RBP5.41□□□□□ -1.54
PPP4R3A-204ENST00000554574 ZNF646O15015 1829 aaPredicted RBP5.41□□□□□ -1.54
PPP4R3A-204ENST00000554574 PSME4Q14997 1843 aa5.41□□□□□ -1.54
PPP4R3A-204ENST00000554574 SLX4Q8IY92 1834 aa5.41□□□□□ -1.54
PPP4R3A-204ENST00000554574 UBA6A0AVT1 1052 aaPredicted RBP5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 PRSS38A1L453 326 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 FITM1A5D6W6 292 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 PROCP04070 461 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 LPLP06858 475 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 MYBP10242 640 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 AKAP5P24588 427 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 TRHRP34981 398 aaPredicted RBP5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 PDE6BP35913 854 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 FXR1P51114 621 aaKnown RBP eCLIP5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 STK3Q13188 491 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 NAA16Q6N069 864 aaPredicted RBP5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 MILR1Q7Z6M3 343 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 ADGRA1Q86SQ6 560 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 NLRX1Q86UT6 975 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 SPPL2CQ8IUH8 684 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 PHYKPLQ8IUZ5 450 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 TBC1D10CQ8IV04 446 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 LCORLQ8N3X6 602 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 TDRD7Q8NHU6 1098 aaKnown RBP5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 SMARCC2Q8TAQ2 1214 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 NSUN4Q96CB9 384 aaKnown RBP5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 RIOK1Q9BRS2 568 aaKnown RBP5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 MYL10Q9BUA6 226 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 LRRC2Q9BYS8 371 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 CSRNP2Q9H175 543 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 C19orf73Q9NVV2 129 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 RGS17Q9UGC6 210 aaPredicted RBP5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 MTMR6Q9Y217 621 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 SLC4A4Q9Y6R1 1079 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 KIF13BQ9NQT8 1826 aa5.4□□□□□ -1.54
PPP4R3A-204ENST00000554574 A6NNZ2 444 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 NDUFS2O75306 463 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 OFD1O75665 1012 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 PDIA3P30101 505 aaKnown RBP5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 ADKP55263 362 aaKnown RBP5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 ANTXR2P58335 489 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 HERVK_113P62684 666 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 HMGN5P82970 282 aaKnown RBP5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 MECOMQ03112 1051 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 MYBPC3Q14896 1274 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 PAN2Q504Q3 1202 aaKnown RBP5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 COBLL1Q53SF7 1204 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 AKNAD1Q5T1N1 836 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 SPTY2D1Q68D10 685 aaPredicted RBP5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 LILRA6Q6PI73 481 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 ZNF804AQ7Z570 1209 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 TRIM48Q8IWZ4 208 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 MIER2Q8N344 545 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 OXR1Q8N573 874 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 MIGA1Q8NAN2 632 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 ZNF384Q8TF68 577 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 TNFRSF12AQ9NP84 129 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 USP25Q9UHP3 1055 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 KCNG1Q9UIX4 513 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 ANAPC4Q9UJX5 808 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 ISY1Q9ULR0 285 aaKnown RBP5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 ANGEL1Q9UNK9 670 aaKnown RBP5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 DNM3Q9UQ16 869 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 FAM50BQ9Y247 325 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 KIF3AQ9Y496 699 aa5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 DDX49Q9Y6V7 483 aaKnown RBP5.4□□□□□ -1.55
PPP4R3A-204ENST00000554574 NEDD4P46934 1319 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 SCN9AQ15858 1988 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 DHX16O60231 1041 aaKnown RBP5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 PRPF6O94906 941 aaKnown RBP5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 APOL3O95236 402 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 MBD3O95983 291 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 DBHP09172 617 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 SRGNP10124 158 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 PCP11498 1178 aaKnown RBP5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 AOAHP28039 575 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 MC4RP32245 332 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 THBS2P35442 1172 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 TDO2P48775 406 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 GPSM2P81274 684 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 KIF23Q02241 960 aaPredicted RBP5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 NR0B2Q15466 257 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 UNQ6494/PRO21346Q6UXR6 183 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 CHST3Q7LGC8 479 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 SP8Q8IXZ3 490 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 NSUN7Q8NE18 718 aaKnown RBP5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 HIPK4Q8NE63 616 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 FBXO41Q8TF61 875 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 FERMT2Q96AC1 680 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 SHISA4Q96DD7 197 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 TUBGCP5Q96RT8 1024 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 KRT23Q9C075 422 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 KCTD10Q9H3F6 313 aa5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 RNF41Q9H4P4 317 aaPredicted RBP5.39□□□□□ -1.55
PPP4R3A-204ENST00000554574 C1orf112Q9NSG2 853 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms