RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CRACR2AQ9BSW2 395 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 AMNQ9BXJ7 453 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 TRIM7Q9C029 511 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 UNC45AQ9H3U1 944 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 SMURF1Q9HCE7 757 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 TOMM22Q9NS69 142 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 HECAQ9UBI9 543 aaPredicted RBP5□□□□□ -1.61
ATXN3-227ENST00000554491 ABT1Q9ULW3 272 aaKnown RBP5□□□□□ -1.61
ATXN3-227ENST00000554491 RABL2BQ9UNT1 228 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 RBBP6Q7Z6E9 1792 aaKnown RBP5□□□□□ -1.61
ATXN3-227ENST00000554491 ANKRD26Q9UPS8 1709 aa5□□□□□ -1.61
ATXN3-227ENST00000554491 AKAP11Q9UKA4 1901 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 F8VZ95 297 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 ZNF561-AS1K7EIQ3 104 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 ARVCFO00192 962 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 AQP7O14520 342 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 CA12O43570 354 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 HARSP12081 509 aaKnown RBP4.99□□□□□ -1.61
ATXN3-227ENST00000554491 GYS1P13807 737 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 XBP1P17861 261 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 MCM7P33993 719 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 GJA4P35212 333 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 RPS19P39019 145 aaKnown RBP4.99□□□□□ -1.61
ATXN3-227ENST00000554491 ECE1P42892 770 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 FXR1P51114 621 aaKnown RBP eCLIP4.99□□□□□ -1.61
ATXN3-227ENST00000554491 RPS6KA3P51812 740 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 ZNF132P52740 706 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 GUCY1A3Q02108 690 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 GRIK3Q13003 919 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 ITPK1Q13572 414 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 PCOLCEQ15113 449 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 HHATQ5VTY9 493 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 TRIM68Q6AZZ1 485 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 USP30Q70CQ3 517 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 CXXC5Q7LFL8 322 aaKnown RBP4.99□□□□□ -1.61
ATXN3-227ENST00000554491 OTOP2Q7RTS6 562 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 MAMDC2Q7Z304 686 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-227ENST00000554491 MYLK4Q86YV6 388 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-227ENST00000554491 SCUBE1Q8IWY4 988 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 LMNTD2Q8IXW0 634 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 TXLNBQ8N3L3 684 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-227ENST00000554491 OR14K1Q8NGZ2 314 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 PTPRN2Q92932 1015 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 CCDC34Q96HJ3 373 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 WNK4Q96J92 1243 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 TLR9Q9NR96 1032 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 UCKL1Q9NWZ5 548 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 PLA2G3Q9NZ20 509 aa4.99□□□□□ -1.61
ATXN3-227ENST00000554491 BARX2Q9UMQ3 279 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-227ENST00000554491 CGNL1Q0VF96 1302 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 KIF7Q2M1P5 1343 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 RNF123Q5XPI4 1314 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 MYO1CO00159 1063 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 NPHP1O15259 732 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 KRT38O76015 456 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 PARNO95453 639 aaKnown RBP4.98□□□□□ -1.61
ATXN3-227ENST00000554491 MMEP08473 750 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 RPL17P18621 184 aaKnown RBP4.98□□□□□ -1.61
ATXN3-227ENST00000554491 HIBADHP31937 336 aaKnown RBP4.98□□□□□ -1.61
ATXN3-227ENST00000554491 USP8P40818 1118 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 MAGEA9P43362 315 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 NUCB2P80303 420 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 DEUP1Q05D60 604 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 DPTQ07507 201 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 DDR1Q08345 913 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 GRM1Q13255 1194 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 KRT72Q14CN4 511 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 CCDC92Q53HC0 331 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-227ENST00000554491 TM4SF20Q53R12 229 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 KANK2Q63ZY3 851 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 FSTL4Q6MZW2 842 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 SYNE3Q6ZMZ3 975 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 MMS22LQ6ZRQ5 1243 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 C16orf59Q7L2K0 433 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 LCA5Q86VQ0 697 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 KRT222Q8N1A0 295 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 MYO1HQ8N1T3 1032 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 AMER2Q8N7J2 671 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 SLC43A3Q8NBI5 491 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 NEU4Q8WWR8 484 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-227ENST00000554491 MIEF2Q96C03 454 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 BICD1Q96G01 975 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 LTV1Q96GA3 475 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-227ENST00000554491 FAXDC2Q96IV6 333 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 CDC6Q99741 560 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 PAGR1Q9BTK6 254 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 BTBD2Q9BX70 525 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 TAF1DQ9H5J8 278 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-227ENST00000554491 AGO3Q9H9G7 860 aaKnown RBP4.98□□□□□ -1.61
ATXN3-227ENST00000554491 SPATS2LQ9NUQ6 558 aaKnown RBP4.98□□□□□ -1.61
ATXN3-227ENST00000554491 HOXC10Q9NYD6 342 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 PFDN2Q9UHV9 154 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 FBXO10Q9UK96 956 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 ZKSCAN5Q9Y2L8 839 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 ATP8A1Q9Y2Q0 1164 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 PCDHA9Q9Y5H5 950 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 SBNO2Q9Y2G9 1366 aa4.98□□□□□ -1.61
ATXN3-227ENST00000554491 TRIOBPQ9H2D6 2365 aa4.97□□□□□ -1.61
ATXN3-227ENST00000554491 SCN7AQ01118 1682 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms