RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 FFAR3O14843 346 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 NUAK1O60285 661 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 HNRNPLP14866 589 aaKnown RBP eCLIP6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 MEOX1P50221 254 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 EIF4HQ15056 248 aaKnown RBP6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 ALDH1L2Q3SY69 923 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 CCDC178Q5BJE1 867 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 KSR2Q6VAB6 950 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 ATF7IPQ6VMQ6 1270 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 UBR3Q6ZT12 1888 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 Q6ZUG5 572 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 COL23A1Q86Y22 540 aaPredicted RBP6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 CARFQ8N187 725 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 MIER2Q8N344 545 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 TXNDC5Q8NBS9 432 aaKnown RBP6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 FATE1Q969F0 183 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 LRGUKQ96M69 825 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 FDXACB1Q9BRP7 624 aaPredicted RBP6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 HAPLN2Q9GZV7 340 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 SMC4Q9NTJ3 1288 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 TUBD1Q9UJT1 453 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 FAM184BQ9ULE4 1060 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 DNM3Q9UQ16 869 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 ZDHHC9Q9Y397 364 aa6.12□□□□□ -1.43
MTHFD1-206ENST00000554353 PKD1L3Q7Z443 1732 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 FLT4P35916 1363 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 PCDH11XQ9BZA7 1347 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 PCDH11YQ9BZA8 1340 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 CYP27B1O15528 508 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 PRPF3O43395 683 aaKnown RBP6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 RFPL1O75677 317 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 ZRANB2O95218 330 aaKnown RBP eCLIP6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 FOSP01100 380 aaPredicted RBP6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 HMOX1P09601 288 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 ETV4P43268 484 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 CD69Q07108 199 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 MLC1Q15049 377 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 ZNF124Q15973 351 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 ADRM1Q16186 407 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 UAP1L1Q3KQV9 507 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 FAM102BQ5T8I3 360 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 SLC4A10Q6U841 1118 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 GPR155Q7Z3F1 870 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 TMEM57Q8N5G2 664 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 POU5F2Q8N7G0 328 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 PDILTQ8N807 584 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 CXorf38Q8TB03 319 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 THUMPD2Q9BTF0 503 aaKnown RBP6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 PAGR1Q9BTK6 254 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 CSRNP2Q9H175 543 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 RWDD1Q9H446 243 aaPredicted RBP6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 BARX1Q9HBU1 254 aaPredicted RBP6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 ZBTB40Q9NUA8 1239 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 MAP3K20Q9NYL2 800 aaKnown RBP6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 ANAPC4Q9UJX5 808 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 PNMA8BQ9ULN7 279 aaPredicted RBP6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 SCINQ9Y6U3 715 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 C4BP0C0L5 1744 aa6.11□□□□□ -1.43
MTHFD1-206ENST00000554353 KIF24Q5T7B8 1368 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 IFRD1O00458 451 aaPredicted RBP6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 NPHP1O15259 732 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 DAPK3O43293 454 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 SEC24DO94855 1032 aaPredicted RBP6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 FSBPO95073 299 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 VCAM1P19320 739 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 CAP1Q01518 475 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 MALLQ13021 153 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 ADAM15Q13444 863 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 PCOLCEQ15113 449 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 MAN2A1Q16706 1144 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 ANO4Q32M45 955 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 MUM1L1Q5H9M0 696 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 L1TD1Q5T7N2 865 aaKnown RBP6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 KLHDC10Q6PID8 442 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 BTNL9Q6UXG8 535 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 LARP4Q71RC2 724 aaKnown RBP eCLIP6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 TSPYL6Q8N831 410 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 GLB1L3Q8NCI6 653 aaPredicted RBP6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 BHLHE22Q8NFJ8 381 aaPredicted RBP6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 ADAMTS17Q8TE56 1095 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 NKD2Q969F2 451 aaPredicted RBP6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 ADI1Q9BV57 179 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 KIAA1683Q9H0B3 1180 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 DMRT3Q9NQL9 472 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 DDX19BQ9UMR2 479 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 PTPN22Q9Y2R2 807 aa6.1□□□□□ -1.43
MTHFD1-206ENST00000554353 PALLDQ8WX93 1383 aa6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 KIF16BQ96L93 1317 aa6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 CFAP69A5D8W1 941 aa6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 IPO8O15397 1037 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 EPB41L2O43491 1005 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 LY86O95711 162 aa6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 ZNF888P0CJ79 500 aaPredicted RBP6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 GSPT1P15170 499 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 HMGB2P26583 209 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 CYP2C19P33261 490 aa6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 DEKP35659 375 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 MRE11P49959 708 aa6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 SLC16A1P53985 500 aa6.09□□□□□ -1.43
MTHFD1-206ENST00000554353 ADKP55263 362 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms