RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 PRRG1O14668 218 aa18.65■□□□□ 0.58
NEK9-204ENST00000554258 ATG13O75143 517 aa18.65■□□□□ 0.58
NEK9-204ENST00000554258 AKAP5P24588 427 aa18.65■□□□□ 0.58
NEK9-204ENST00000554258 CLK2P49760 499 aaKnown RBP18.65■□□□□ 0.58
NEK9-204ENST00000554258 IRX4P78413 519 aa18.65■□□□□ 0.58
NEK9-204ENST00000554258 HMGN5P82970 282 aaKnown RBP18.65■□□□□ 0.58
NEK9-204ENST00000554258 AKAP17AQ02040 695 aaKnown RBP18.65■□□□□ 0.58
NEK9-204ENST00000554258 JAKMIP3Q5VZ66 844 aa18.65■□□□□ 0.58
NEK9-204ENST00000554258 NOTUMQ6P988 496 aa18.65■□□□□ 0.58
NEK9-204ENST00000554258 FAM177A1Q8N128 213 aaPredicted RBP18.65■□□□□ 0.58
NEK9-204ENST00000554258 CAMKK1Q8N5S9 505 aa18.65■□□□□ 0.58
NEK9-204ENST00000554258 ZNF713Q8N859 430 aaPredicted RBP18.65■□□□□ 0.58
NEK9-204ENST00000554258 CRYGNQ8WXF5 182 aa18.65■□□□□ 0.58
NEK9-204ENST00000554258 E2F7Q96AV8 911 aa18.65■□□□□ 0.58
NEK9-204ENST00000554258 CCDC51Q96ER9 411 aa18.65■□□□□ 0.58
NEK9-204ENST00000554258 NXF3Q9H4D5 531 aaKnown RBP18.65■□□□□ 0.58
NEK9-204ENST00000554258 ORC3Q9UBD5 711 aaPredicted RBP18.65■□□□□ 0.58
NEK9-204ENST00000554258 USP9XQ93008 2570 aaPredicted RBP18.65■□□□□ 0.58
NEK9-204ENST00000554258 ARHGEF37A1IGU5 675 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 CASTOR2A6NHX0 329 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 SFNP31947 248 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 ELF1P32519 619 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 JAK3P52333 1124 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 ZNF605Q86T29 641 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 HHIPQ96QV1 700 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 UBL7Q96S82 380 aaPredicted RBP18.64■□□□□ 0.57
NEK9-204ENST00000554258 CSRNP2Q9H175 543 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 GLT8D2Q9H1C3 349 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 SH3GLB2Q9NR46 395 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 BARHL2Q9NY43 387 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 KLK14Q9P0G3 267 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 MTRRQ9UBK8 725 aa18.64■□□□□ 0.57
NEK9-204ENST00000554258 RBM19Q9Y4C8 960 aaKnown RBP18.64■□□□□ 0.57
NEK9-204ENST00000554258 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.64■□□□□ 0.57
NEK9-204ENST00000554258 PLXNB3Q9ULL4 1909 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 DDX11L8A8MPP1 907 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 DTNBO60941 627 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 C1QL1O75973 258 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 MAPK8P45983 427 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 TUSC3Q13454 348 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 ZNF423Q2M1K9 1284 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.63■□□□□ 0.57
NEK9-204ENST00000554258 CYP2U1Q7Z449 544 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 RAB44Q7Z6P3 723 aaPredicted RBP18.63■□□□□ 0.57
NEK9-204ENST00000554258 PRPF31Q8WWY3 499 aaKnown RBP18.63■□□□□ 0.57
NEK9-204ENST00000554258 CPB2Q96IY4 423 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 SLITRK6Q9H5Y7 841 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 IGSF5Q9NSI5 407 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 GTSE1Q9NYZ3 720 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 RAI2Q9Y5P3 530 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 PIEZO2Q9H5I5 2752 aa18.63■□□□□ 0.57
NEK9-204ENST00000554258 MEFVO15553 781 aaPredicted RBP18.62■□□□□ 0.57
NEK9-204ENST00000554258 TSPAN1O60635 241 aa18.62■□□□□ 0.57
NEK9-204ENST00000554258 GAS7O60861 476 aa18.62■□□□□ 0.57
NEK9-204ENST00000554258 STBD1O95210 358 aa18.62■□□□□ 0.57
NEK9-204ENST00000554258 AXLP30530 894 aa18.62■□□□□ 0.57
NEK9-204ENST00000554258 NCBP1Q09161 790 aaKnown RBP18.62■□□□□ 0.57
NEK9-204ENST00000554258 FCHO2Q0JRZ9 810 aa18.62■□□□□ 0.57
NEK9-204ENST00000554258 LMAN2Q12907 356 aa18.62■□□□□ 0.57
NEK9-204ENST00000554258 MDM1Q8TC05 714 aa18.62■□□□□ 0.57
NEK9-204ENST00000554258 PSPC1Q8WXF1 523 aaKnown RBP18.62■□□□□ 0.57
NEK9-204ENST00000554258 SLC39A7Q92504 469 aa18.62■□□□□ 0.57
NEK9-204ENST00000554258 WASF1Q92558 559 aa18.62■□□□□ 0.57
NEK9-204ENST00000554258 UNC45AQ9H3U1 944 aa18.62■□□□□ 0.57
NEK9-204ENST00000554258 CCDC194A0A1B0GVG4 234 aa18.61■□□□□ 0.57
NEK9-204ENST00000554258 ESYT2A0FGR8 921 aa18.61■□□□□ 0.57
NEK9-204ENST00000554258 GJA1P17302 382 aa18.61■□□□□ 0.57
NEK9-204ENST00000554258 LAMTOR4Q0VGL1 99 aa18.61■□□□□ 0.57
NEK9-204ENST00000554258 BECN1Q14457 450 aa18.61■□□□□ 0.57
NEK9-204ENST00000554258 PIP4P1Q86T03 277 aa18.61■□□□□ 0.57
NEK9-204ENST00000554258 ELMOD1Q8N336 334 aa18.61■□□□□ 0.57
NEK9-204ENST00000554258 SLC7A3Q8WY07 619 aa18.61■□□□□ 0.57
NEK9-204ENST00000554258 RSPRY1Q96DX4 576 aa18.61■□□□□ 0.57
NEK9-204ENST00000554258 AIFM3Q96NN9 605 aa18.61■□□□□ 0.57
NEK9-204ENST00000554258 POLR3BQ9NW08 1133 aaPredicted RBP18.61■□□□□ 0.57
NEK9-204ENST00000554258 SNTG2Q9NY99 539 aa18.61■□□□□ 0.57
NEK9-204ENST00000554258 PARP2Q9UGN5 583 aa18.61■□□□□ 0.57
NEK9-204ENST00000554258 ZMYM2Q9UBW7 1377 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 TK2O00142 265 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 MOSPD3O75425 235 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 MYL4P12829 197 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 FGFR3P22607 806 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 PMS2CLQ68D20 193 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 PLA2G4FQ68DD2 849 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 IQCEQ6IPM2 695 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 MIER3Q7Z3K6 550 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 HAUS6Q7Z4H7 955 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 HS6ST3Q8IZP7 471 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 RNF149Q8NC42 400 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 TMEM143Q96AN5 459 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 TEKT3Q9BXF9 490 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 ZMYND12Q9H0C1 365 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 DACH1Q9UI36 760 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 SMC3Q9UQE7 1217 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 BACE2Q9Y5Z0 518 aa18.6■□□□□ 0.57
NEK9-204ENST00000554258 GJB2P29033 226 aa18.59■□□□□ 0.57
NEK9-204ENST00000554258 SEMA3BQ13214 749 aa18.59■□□□□ 0.57
NEK9-204ENST00000554258 LRCH2Q5VUJ6 765 aa18.59■□□□□ 0.57
NEK9-204ENST00000554258 ZNF461Q8TAF7 563 aa18.59■□□□□ 0.57
NEK9-204ENST00000554258 PIGKQ92643 395 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms