RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 SCAND2PQ9GZW5 306 aaPredicted RBP8.49□□□□□ -1.05
ABCD4-220ENST00000553998 LMAN1LQ9HAT1 526 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 TRPV4Q9HBA0 871 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 ZNF334Q9HCZ1 680 aaPredicted RBP8.49□□□□□ -1.05
ABCD4-220ENST00000553998 TFIP11Q9UBB9 837 aaKnown RBP8.49□□□□□ -1.05
ABCD4-220ENST00000553998 LRWD1Q9UFC0 647 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 PARP2Q9UGN5 583 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 FBXO2Q9UK22 296 aaPredicted RBP8.49□□□□□ -1.05
ABCD4-220ENST00000553998 RCOR1Q9UKL0 485 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 POLIQ9UNA4 740 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 FRYQ5TBA9 3013 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 PATJQ8NI35 1801 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 VWA3AA6NCI4 1184 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 CASTOR2A6NHX0 329 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 K7ESF4 209 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 ARNTLO00327 626 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 DGAT1O75907 488 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 NPTXRO95502 500 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 THP07101 528 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 GLRA2P23416 452 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 MARCKSP29966 332 aaPredicted RBP8.48□□□□□ -1.05
ABCD4-220ENST00000553998 SIM2Q14190 667 aaPredicted RBP8.48□□□□□ -1.05
ABCD4-220ENST00000553998 LPAL2Q16609 132 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 FAM187BQ17R55 369 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 XKR9Q5GH70 373 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 FAM78AQ5JUQ0 283 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 N4BP2L1Q5TBK1 243 aaPredicted RBP8.48□□□□□ -1.05
ABCD4-220ENST00000553998 SLC8B1Q6J4K2 584 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 C1orf228Q6PIY5 440 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 LONP2Q86WA8 852 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 CEP57Q86XR8 500 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 ZNF461Q8TAF7 563 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 FAM3CQ92520 227 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 MSANTD3Q96H12 275 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 DYDC2Q96IM9 177 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 ASB16Q96NS5 453 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 TRMT61BQ9BVS5 477 aaKnown RBP8.48□□□□□ -1.05
ABCD4-220ENST00000553998 FZD8Q9H461 694 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 ZFP14Q9HCL3 533 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 ANKEF1Q9NU02 776 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 RGL1Q9NZL6 768 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 KLK14Q9P0G3 267 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 CACNG4Q9UBN1 327 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 WDFY3Q8IZQ1 3526 aa8.48□□□□□ -1.05
ABCD4-220ENST00000553998 NRG2O14511 850 aaPredicted RBP8.47□□□□□ -1.05
ABCD4-220ENST00000553998 ZNF197O14709 1029 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 CUTAO60888 179 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 PROS1P07225 676 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 ZNF806P0C7X5 589 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 SPATA31C1P0DKV0 1188 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 CEBPBP17676 345 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 PSMC3P17980 439 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 IGFBP6P24592 240 aaPredicted RBP8.47□□□□□ -1.05
ABCD4-220ENST00000553998 TXLNAP40222 546 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 CCT6AP40227 531 aaKnown RBP8.47□□□□□ -1.05
ABCD4-220ENST00000553998 UBA7P41226 1012 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 SATB1Q01826 763 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 CYP4A11Q02928 519 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 DMWDQ09019 674 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 CTTNQ14247 550 aaKnown RBP8.47□□□□□ -1.05
ABCD4-220ENST00000553998 FOXD4L6Q3SYB3 417 aaPredicted RBP8.47□□□□□ -1.05
ABCD4-220ENST00000553998 HYIQ5T013 277 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 CDCA2Q69YH5 1023 aaPredicted RBP8.47□□□□□ -1.05
ABCD4-220ENST00000553998 FOXD4L3Q6VB84 417 aaPredicted RBP8.47□□□□□ -1.05
ABCD4-220ENST00000553998 PRR23BQ6ZRT6 265 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 ANKS3Q6ZW76 656 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 CDR2LQ86X02 465 aaPredicted RBP8.47□□□□□ -1.05
ABCD4-220ENST00000553998 CATSPER3Q86XQ3 398 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 MFSD6LQ8IWD5 586 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 TPH2Q8IWU9 490 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 TCEAL8Q8IYN2 117 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 SNX29Q8TEQ0 813 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 HASPINQ8TF76 798 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 DEPDC1BQ8WUY9 529 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 LEO1Q8WVC0 666 aaPredicted RBP8.47□□□□□ -1.05
ABCD4-220ENST00000553998 ING5Q8WYH8 240 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 SMARCD2Q92925 531 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 LOXL4Q96JB6 756 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 SPATA32Q96LK8 384 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 NACC1Q96RE7 527 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 CCSER1Q9C0I3 900 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 BRD9Q9H8M2 597 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 BMP2KQ9NSY1 1161 aaPredicted RBP8.47□□□□□ -1.05
ABCD4-220ENST00000553998 NDRG2Q9UN36 371 aaKnown RBP8.47□□□□□ -1.05
ABCD4-220ENST00000553998 CDY1Q9Y6F8 540 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 PIAS3Q9Y6X2 628 aa8.47□□□□□ -1.05
ABCD4-220ENST00000553998 MTCL1Q9Y4B5 1905 aaKnown RBP8.46□□□□□ -1.05
ABCD4-220ENST00000553998 WDR27A2RRH5 827 aa8.46□□□□□ -1.06
ABCD4-220ENST00000553998 PP2D1A8MPX8 630 aa8.46□□□□□ -1.06
ABCD4-220ENST00000553998 CHURC1-FNTBB4DL54 471 aa8.46□□□□□ -1.06
ABCD4-220ENST00000553998 MOSPD3O75425 235 aa8.46□□□□□ -1.06
ABCD4-220ENST00000553998 MED24O75448 989 aa8.46□□□□□ -1.06
ABCD4-220ENST00000553998 ATF2P15336 505 aa8.46□□□□□ -1.06
ABCD4-220ENST00000553998 CCR2P41597 374 aa8.46□□□□□ -1.06
ABCD4-220ENST00000553998 ME1P48163 572 aa8.46□□□□□ -1.06
ABCD4-220ENST00000553998 FNTBP49356 437 aa8.46□□□□□ -1.06
ABCD4-220ENST00000553998 RARRES1P49788 294 aa8.46□□□□□ -1.06
ABCD4-220ENST00000553998 EPHA5P54756 1037 aa8.46□□□□□ -1.06
ABCD4-220ENST00000553998 GRIN1Q05586 938 aa8.46□□□□□ -1.06
ABCD4-220ENST00000553998 MRPL58Q14197 206 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms