RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 NARSO43776 548 aaKnown RBP17.42■□□□□ 0.38
ACTN1-209ENST00000553659 SPATA31D3P0C874 917 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 MYBP10242 640 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 SKILP12757 684 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 GLRA2P23416 452 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 CCNE1P24864 410 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 PRCPP42785 496 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 NR1I3Q14994 352 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 USP41Q3LFD5 358 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 SPATA31D4Q6ZUB0 917 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 PALB2Q86YC2 1186 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 SLC44A3Q8N4M1 653 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 DTWD2Q8NBA8 298 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 RSAD2Q8WXG1 361 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 ZNF707Q96C28 371 aaPredicted RBP17.42■□□□□ 0.38
ACTN1-209ENST00000553659 MED15Q96RN5 788 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 GPR62Q9BZJ7 368 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 NXF3Q9H4D5 531 aaKnown RBP17.42■□□□□ 0.38
ACTN1-209ENST00000553659 SAMSN1Q9NSI8 373 aaKnown RBP17.42■□□□□ 0.38
ACTN1-209ENST00000553659 FNIP2Q9P278 1114 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 MAGEC2Q9UBF1 373 aaPredicted RBP17.42■□□□□ 0.38
ACTN1-209ENST00000553659 PYCARDQ9ULZ3 195 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 ITIH6Q6UXX5 1313 aa17.42■□□□□ 0.38
ACTN1-209ENST00000553659 CFAP54Q96N23 3096 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 A0A1B0GUA9 196 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 TUBB4AP04350 444 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 CFHP08603 1231 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 TPM1P09493 284 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 AKAP5P24588 427 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 RPA1P27694 616 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 RARRES1P49788 294 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 STX17P56962 302 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 TRIM14Q14142 442 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 MCM6Q14566 821 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 ANGPT1Q15389 498 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 FUT10Q6P4F1 479 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 SLC27A1Q6PCB7 646 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 LILRA6Q6PI73 481 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 SMYD4Q8IYR2 804 aaPredicted RBP17.41■□□□□ 0.38
ACTN1-209ENST00000553659 NAP1L5Q96NT1 182 aaPredicted RBP17.41■□□□□ 0.38
ACTN1-209ENST00000553659 MYADMQ96S97 322 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 POLR3CQ9BUI4 534 aaPredicted RBP17.41■□□□□ 0.38
ACTN1-209ENST00000553659 PIDD1Q9HB75 910 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 ZDHHC7Q9NXF8 308 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.41■□□□□ 0.384e-6■■□□□ 14.1
ACTN1-209ENST00000553659 ADAM28Q9UKQ2 775 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 GDAQ9Y2T3 454 aa17.41■□□□□ 0.38
ACTN1-209ENST00000553659 RIF1Q5UIP0 2472 aaKnown RBP17.41■□□□□ 0.38
ACTN1-209ENST00000553659 ZMYM2Q9UBW7 1377 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 KRBA1A5PL33 1030 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 MYMKA6NI61 221 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 STK25O00506 426 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 B4GALT5O43286 388 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 TGM5O43548 720 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 NPTXRO95502 500 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 CCZ1BP86790 482 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 CCZ1P86791 482 aaPredicted RBP17.4■□□□□ 0.38
ACTN1-209ENST00000553659 CREMQ03060 361 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 GRIK3Q13003 919 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 DNTTIP2Q5QJE6 756 aaKnown RBP17.4■□□□□ 0.38
ACTN1-209ENST00000553659 CCDC65Q8IXS2 484 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 GUF1Q8N442 669 aaKnown RBP17.4■□□□□ 0.38
ACTN1-209ENST00000553659 LRRC15Q8TF66 581 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 RIN2Q8WYP3 895 aaPredicted RBP17.4■□□□□ 0.38
ACTN1-209ENST00000553659 B3GALT6Q96L58 329 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 CCDC43Q96MW1 224 aaKnown RBP17.4■□□□□ 0.38
ACTN1-209ENST00000553659 PRKD2Q9BZL6 878 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 KLK14Q9P0G3 267 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 PARP2Q9UGN5 583 aa17.4■□□□□ 0.38
ACTN1-209ENST00000553659 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.4■□□□□ 0.38
ACTN1-209ENST00000553659 TRIP11Q15643 1979 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 KCNJ18B7U540 433 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 KIF2AO00139 706 aaPredicted RBP17.39■□□□□ 0.37
ACTN1-209ENST00000553659 TADA2AO75478 443 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 SRFP11831 508 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 LAMP2P13473 410 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 FOXK2Q01167 660 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 LRMPQ12912 555 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 TBX2Q13207 712 aaPredicted RBP17.39■□□□□ 0.37
ACTN1-209ENST00000553659 KCNJ12Q14500 433 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 TCP11X2Q5H9J9 407 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 CDR2LQ86X02 465 aaPredicted RBP17.39■□□□□ 0.37
ACTN1-209ENST00000553659 GLYCTKQ8IVS8 523 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 PIGOQ8TEQ8 1089 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 POLR3FQ9H1D9 316 aaPredicted RBP17.39■□□□□ 0.37
ACTN1-209ENST00000553659 TUFT1Q9NNX1 390 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 DNM3Q9UQ16 869 aa17.39■□□□□ 0.37
ACTN1-209ENST00000553659 PLA2G4BP0C869 781 aa17.38■□□□□ 0.37
ACTN1-209ENST00000553659 LRRC63Q05C16 580 aa17.38■□□□□ 0.37
ACTN1-209ENST00000553659 ARMCX5Q6P1M9 558 aa17.38■□□□□ 0.37
ACTN1-209ENST00000553659 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
ACTN1-209ENST00000553659 APTXQ7Z2E3 356 aaKnown RBP17.38■□□□□ 0.37
ACTN1-209ENST00000553659 RABGGTAQ92696 567 aa17.38■□□□□ 0.37
ACTN1-209ENST00000553659 DDX12PQ92771 950 aa17.38■□□□□ 0.37
ACTN1-209ENST00000553659 IQCDQ96DY2 449 aa17.38■□□□□ 0.37
ACTN1-209ENST00000553659 PRIMPOLQ96LW4 560 aa17.38■□□□□ 0.37
ACTN1-209ENST00000553659 TSG101Q99816 390 aa17.38■□□□□ 0.37
ACTN1-209ENST00000553659 NAA15Q9BXJ9 866 aaKnown RBP17.38■□□□□ 0.37
ACTN1-209ENST00000553659 CA14Q9ULX7 337 aa17.38■□□□□ 0.37
ACTN1-209ENST00000553659 KIAA1024Q9UPX6 916 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms