RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 RECQL4O94761 1208 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 CEBPBP17676 345 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 PSMC3P17980 439 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 NAMPTP43490 491 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 PRPF4BQ13523 1007 aaKnown RBP12.95□□□□□ -0.34
SRP54-203ENST00000553544 GRM2Q14416 872 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 NAB2Q15742 525 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 FAM78AQ5JUQ0 283 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 CYP4A22Q5TCH4 519 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 ARL6IP4Q66PJ3 421 aaKnown RBP12.95□□□□□ -0.34
SRP54-203ENST00000553544 MAP4K3Q8IVH8 894 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 CORO1BQ9BR76 489 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 CCDC113Q9H0I3 377 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 C2orf40Q9H1Z8 148 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 ZNF334Q9HCZ1 680 aaPredicted RBP12.95□□□□□ -0.34
SRP54-203ENST00000553544 DNM3Q9UQ16 869 aa12.95□□□□□ -0.34
SRP54-203ENST00000553544 ZFHX4Q86UP3 3567 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 PDCD11Q14690 1871 aaKnown RBP12.94□□□□□ -0.34
SRP54-203ENST00000553544 COL4A3Q01955 1670 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 TTLL13PA6NNM8 815 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 TMEM189-UBE2V1I3L0A0 370 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 HRO43593 1189 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 ABLIM3O94929 683 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 GDI1P31150 447 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 MLLT6P55198 1093 aaPredicted RBP12.94□□□□□ -0.34
SRP54-203ENST00000553544 PPP2R5AQ15172 486 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 MAPK6Q16659 721 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 POTEHQ6S545 545 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 PRR23CQ6ZRP0 262 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 KCNK18Q7Z418 384 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 SPEM1Q8N4L4 309 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 KCTD17Q8N5Z5 321 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 KIFAP3Q92845 792 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 UROC1Q96N76 676 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 ASB16Q96NS5 453 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 PNMA5Q96PV4 448 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 CXCL16Q9H2A7 254 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 PDZD7Q9H5P4 517 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 POLD4Q9HCU8 107 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 GDAQ9Y2T3 454 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 PIAS3Q9Y6X2 628 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 CITO14578 2027 aa12.94□□□□□ -0.34
SRP54-203ENST00000553544 ACKR2O00590 384 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 ZNF263O14978 683 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 EDN1P05305 212 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 CHRNB1P11230 501 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 ATF2P15336 505 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 FCARP24071 287 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 TKTP29401 623 aaKnown RBP12.93□□□□□ -0.34
SRP54-203ENST00000553544 CLCNKBP51801 687 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 UPP1Q16831 310 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 PRSS36Q5K4E3 855 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 IL31Q6EBC2 164 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 IQCEQ6IPM2 695 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 SLC8B1Q6J4K2 584 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 RINT1Q6NUQ1 792 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 C1orf228Q6PIY5 440 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 C1orf186Q6ZWK4 172 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 PDZD4Q76G19 769 aaPredicted RBP12.93□□□□□ -0.34
SRP54-203ENST00000553544 BRAPQ7Z569 592 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.93□□□□□ -0.34
SRP54-203ENST00000553544 TCEAL8Q8IYN2 117 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 DAW1Q8N136 415 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 ELMOD1Q8N336 334 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 DEPDC1BQ8WUY9 529 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 SMARCD2Q92925 531 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 TCEAL4Q96EI5 215 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 DDX27Q96GQ7 796 aaKnown RBP12.93□□□□□ -0.34
SRP54-203ENST00000553544 INTS4Q96HW7 963 aaKnown RBP12.93□□□□□ -0.34
SRP54-203ENST00000553544 ZNF512Q96ME7 567 aaPredicted RBP12.93□□□□□ -0.34
SRP54-203ENST00000553544 CYP4F11Q9HBI6 524 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 ANGPTL2Q9UKU9 493 aa12.93□□□□□ -0.34
SRP54-203ENST00000553544 CNOT1A5YKK6 2376 aaKnown RBP12.93□□□□□ -0.34
SRP54-203ENST00000553544 USP24Q9UPU5 2620 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 WDR27A2RRH5 827 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 VWA3AA6NCI4 1184 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 CHURC1-FNTBB4DL54 471 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 GDF9O60383 454 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 PRKCBP05771 671 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 LIG1P18858 919 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 IGFBP6P24592 240 aaPredicted RBP12.92□□□□□ -0.34
SRP54-203ENST00000553544 CCNE1P24864 410 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 FNTBP49356 437 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 EFNA5P52803 228 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 ARPP19P56211 112 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 SATB1Q01826 763 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 DMWDQ09019 674 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 MAPK7Q13164 816 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 CD300LGQ6UXG3 332 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 APBB1IPQ7Z5R6 666 aaPredicted RBP12.92□□□□□ -0.34
SRP54-203ENST00000553544 LONP2Q86WA8 852 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 MFSD6LQ8IWD5 586 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 DEPTORQ8TB45 409 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 E2F7Q96AV8 911 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 IFT74Q96LB3 600 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 AK8Q96MA6 479 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 ZSWIM3Q96MP5 696 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 PPP1R10Q96QC0 940 aaKnown RBP12.92□□□□□ -0.34
SRP54-203ENST00000553544 RUSC1Q9BVN2 902 aa12.92□□□□□ -0.34
SRP54-203ENST00000553544 NOTCH4Q99466 2003 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms