RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 MTHFRP42898 656 aa20.95■□□□□ 0.94
PTCH1-227ENST00000553256 ASIC1P78348 528 aa20.95■□□□□ 0.94
PTCH1-227ENST00000553256 BMT2Q1RMZ1 405 aa20.95■□□□□ 0.94
PTCH1-227ENST00000553256 SLC8B1Q6J4K2 584 aa20.95■□□□□ 0.94
PTCH1-227ENST00000553256 PDXDC1Q6P996 788 aa20.95■□□□□ 0.94
PTCH1-227ENST00000553256 CEP57Q86XR8 500 aa20.95■□□□□ 0.94
PTCH1-227ENST00000553256 RNF135Q8IUD6 432 aa20.95■□□□□ 0.94
PTCH1-227ENST00000553256 POMGNT1Q8WZA1 660 aa20.95■□□□□ 0.94
PTCH1-227ENST00000553256 PYM1Q9BRP8 204 aaKnown RBP20.95■□□□□ 0.94
PTCH1-227ENST00000553256 GOLPH3LQ9H4A5 285 aa20.95■□□□□ 0.94
PTCH1-227ENST00000553256 TMEM206Q9H813 350 aa20.95■□□□□ 0.94
PTCH1-227ENST00000553256 MTCL1Q9Y4B5 1905 aaKnown RBP20.95■□□□□ 0.94
PTCH1-227ENST00000553256 SPTLC1O15269 473 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 TRAPPC3O43617 180 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 SPATA31D3P0C874 917 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 SSTR3P32745 418 aaPredicted RBP20.94■□□□□ 0.94
PTCH1-227ENST00000553256 NDUFA8P51970 172 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 FAM26FQ5R3K3 315 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 VARS2Q5ST30 1063 aaKnown RBP20.94■□□□□ 0.94
PTCH1-227ENST00000553256 SCARA3Q6AZY7 606 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 CES5AQ6NT32 575 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 SPATA31D4Q6ZUB0 917 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 BRSK2Q8IWQ3 736 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 TMEM87AQ8NBN3 555 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 KREMEN2Q8NCW0 462 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 BORCS6Q96GS4 357 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 ATP6V1DQ9Y5K8 247 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 C2orf16Q68DN1 1984 aa20.94■□□□□ 0.94
PTCH1-227ENST00000553256 ABLIM3O94929 683 aa20.93■□□□□ 0.94
PTCH1-227ENST00000553256 AFMP43652 599 aa20.93■□□□□ 0.94
PTCH1-227ENST00000553256 ATAT1Q5SQI0 421 aa20.93■□□□□ 0.94
PTCH1-227ENST00000553256 C9orf57Q5W0N0 161 aa20.93■□□□□ 0.94
PTCH1-227ENST00000553256 CYP26C1Q6V0L0 522 aa20.93■□□□□ 0.94
PTCH1-227ENST00000553256 ANKS3Q6ZW76 656 aa20.93■□□□□ 0.94
PTCH1-227ENST00000553256 GLYCTKQ8IVS8 523 aa20.93■□□□□ 0.94
PTCH1-227ENST00000553256 GDPD2Q9HCC8 539 aa20.93■□□□□ 0.94
PTCH1-227ENST00000553256 ZDHHC7Q9NXF8 308 aa20.93■□□□□ 0.94
PTCH1-227ENST00000553256 USP25Q9UHP3 1055 aa20.93■□□□□ 0.94
PTCH1-227ENST00000553256 PCDHB8Q9UN66 801 aa20.93■□□□□ 0.94
PTCH1-227ENST00000553256 ZMYND10O75800 440 aa20.92■□□□□ 0.94
PTCH1-227ENST00000553256 OAZ2O95190 189 aa20.92■□□□□ 0.94
PTCH1-227ENST00000553256 OR1D2P34982 312 aa20.92■□□□□ 0.94
PTCH1-227ENST00000553256 LILRA4P59901 499 aa20.92■□□□□ 0.94
PTCH1-227ENST00000553256 KIAA0895Q8NCT3 520 aa20.92■□□□□ 0.94
PTCH1-227ENST00000553256 SAAL1Q96ER3 474 aa20.92■□□□□ 0.94
PTCH1-227ENST00000553256 RPGRIP1Q96KN7 1286 aa20.92■□□□□ 0.94
PTCH1-227ENST00000553256 RIPOR3Q96MK2 946 aa20.92■□□□□ 0.94
PTCH1-227ENST00000553256 FAM213AQ9BRX8 229 aa20.92■□□□□ 0.94
PTCH1-227ENST00000553256 USTQ9Y2C2 406 aa20.92■□□□□ 0.94
PTCH1-227ENST00000553256 CDY1Q9Y6F8 540 aa20.92■□□□□ 0.94
PTCH1-227ENST00000553256 CCDC195A0A1B0GUA6 201 aa20.91■□□□□ 0.94
PTCH1-227ENST00000553256 C2CD4DB7Z1M9 353 aa20.91■□□□□ 0.94
PTCH1-227ENST00000553256 EXTL3O43909 919 aa20.91■□□□□ 0.94
PTCH1-227ENST00000553256 N4BP1O75113 896 aaKnown RBP20.91■□□□□ 0.94
PTCH1-227ENST00000553256 UBE4BO95155 1302 aa20.91■□□□□ 0.94
PTCH1-227ENST00000553256 POU2F2P09086 479 aa20.91■□□□□ 0.94
PTCH1-227ENST00000553256 NUCB2P80303 420 aa20.91■□□□□ 0.94
PTCH1-227ENST00000553256 STK4Q13043 487 aa20.91■□□□□ 0.94
PTCH1-227ENST00000553256 TMEM132DQ14C87 1099 aa20.91■□□□□ 0.94
PTCH1-227ENST00000553256 NT5DC4Q86YG4 428 aa20.91■□□□□ 0.94
PTCH1-227ENST00000553256 PRKD2Q9BZL6 878 aa20.91■□□□□ 0.94
PTCH1-227ENST00000553256 GZF1Q9H116 711 aaPredicted RBP20.91■□□□□ 0.94
PTCH1-227ENST00000553256 FBXL5Q9UKA1 691 aa20.91■□□□□ 0.94
PTCH1-227ENST00000553256 WDR27A2RRH5 827 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 DCXO43602 365 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 VNN2O95498 520 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 HOXA9P31269 272 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 ROR1Q01973 937 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 BEST2Q8NFU1 509 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 TMEM174Q8WUU8 243 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 FAM84AQ96KN4 292 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 WDR6Q9NNW5 1121 aaKnown RBP20.9■□□□□ 0.94
PTCH1-227ENST00000553256 AGPAT3Q9NRZ7 376 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 DPP7Q9UHL4 492 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 MUTYHQ9UIF7 546 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 NUB1Q9Y5A7 615 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 TECTAO75443 2155 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 SCN1AP35498 2009 aa20.9■□□□□ 0.94
PTCH1-227ENST00000553256 PTPRJQ12913 1337 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 GOLGA8IPA6NC78 632 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 GOLGA8JA6NMD2 632 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 KIAA0391O15091 583 aaKnown RBP20.89■□□□□ 0.93
PTCH1-227ENST00000553256 XPOTO43592 962 aaKnown RBP20.89■□□□□ 0.93
PTCH1-227ENST00000553256 GPR37L1O60883 481 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 IL18RAPO95256 599 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 LDHAP00338 332 aaKnown RBP20.89■□□□□ 0.93
PTCH1-227ENST00000553256 MYL1P05976 194 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 PRR29P0C7W0 189 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 MCM4P33991 863 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 SYKP43405 635 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 C12orf56Q8IXR9 622 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 CEP57L1Q8IYX8 460 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 ZDHHC14Q8IZN3 488 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 SYCP3Q8IZU3 236 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 ZNF461Q8TAF7 563 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 PCIF1Q9H4Z3 704 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 SLC39A2Q9NP94 309 aa20.89■□□□□ 0.93
PTCH1-227ENST00000553256 TYMPP19971 482 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 PAX3P23760 479 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 SNRPFP62306 86 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms