RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 RPL36ALQ969Q0 106 aaKnown RBP4.89□□□□□ -1.63
USP44-207ENST00000552237 VTA1Q9NP79 307 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 MCM8Q9UJA3 840 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 TBC1D30Q9Y2I9 924 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 ATP8A1Q9Y2Q0 1164 aa4.89□□□□□ -1.63
USP44-207ENST00000552237 GOLGA8AA7E2F4 631 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 MPPED1O15442 326 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 CKBP12277 381 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 IL2RBP14784 551 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 KELP23276 732 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 SLC6A2P23975 617 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 ECHS1P30084 290 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 SCAND1P57086 179 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 ETFDHQ16134 617 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 PITRM1Q5JRX3 1037 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 RNF219Q5W0B1 726 aaPredicted RBP4.88□□□□□ -1.63
USP44-207ENST00000552237 ZNF529Q6P280 563 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 FAM180AQ6UWF9 173 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 CRELD2Q6UXH1 353 aaPredicted RBP4.88□□□□□ -1.63
USP44-207ENST00000552237 SPATS2Q86XZ4 545 aaKnown RBP4.88□□□□□ -1.63
USP44-207ENST00000552237 CMIPQ8IY22 773 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 COG1Q8WTW3 980 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 TFAP2BQ92481 460 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 PRDM12Q9H4Q4 367 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 BCO1Q9HAY6 547 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 SIK3Q9Y2K2 1263 aa4.88□□□□□ -1.63
USP44-207ENST00000552237 LOC105371045A0A1W2PR82 267 aa4.87□□□□□ -1.63
USP44-207ENST00000552237 ANKRD62A6NC57 917 aa4.87□□□□□ -1.63
USP44-207ENST00000552237 PRKD3O94806 890 aa4.87□□□□□ -1.63
USP44-207ENST00000552237 SREBF1P36956 1147 aa4.87□□□□□ -1.63
USP44-207ENST00000552237 KLF9Q13886 244 aaPredicted RBP4.87□□□□□ -1.63
USP44-207ENST00000552237 UGT8Q16880 541 aa4.87□□□□□ -1.63
USP44-207ENST00000552237 NBPF8Q3BBV2 869 aa4.87□□□□□ -1.63
USP44-207ENST00000552237 C11orf87Q6NUJ2 197 aa4.87□□□□□ -1.63
USP44-207ENST00000552237 TGFBRAP1Q8WUH2 860 aa4.87□□□□□ -1.63
USP44-207ENST00000552237 EAF2Q96CJ1 260 aaPredicted RBP4.87□□□□□ -1.63
USP44-207ENST00000552237 MARS2Q96GW9 593 aaKnown RBP4.87□□□□□ -1.63
USP44-207ENST00000552237 AHCYL2Q96HN2 611 aaKnown RBP4.87□□□□□ -1.63
USP44-207ENST00000552237 MED15Q96RN5 788 aa4.87□□□□□ -1.63
USP44-207ENST00000552237 PNKPQ96T60 521 aa4.87□□□□□ -1.63
USP44-207ENST00000552237 SENP6Q9GZR1 1112 aaPredicted RBP4.87□□□□□ -1.63
USP44-207ENST00000552237 EDARQ9UNE0 448 aa4.87□□□□□ -1.63
USP44-207ENST00000552237 SHROOM4Q9ULL8 1493 aa4.87□□□□□ -1.63
USP44-207ENST00000552237 LINC01548A6NM66 108 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 PRSS23O95084 383 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 AMPD3Q01432 767 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 FAPQ12884 760 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 GJC2Q5T442 439 aaPredicted RBP4.86□□□□□ -1.63
USP44-207ENST00000552237 SUMO4Q6EEV6 95 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 TOR1AIP2Q8NFQ8 470 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 SPATA3Q8NHX4 192 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 RIN2Q8WYP3 895 aaPredicted RBP4.86□□□□□ -1.63
USP44-207ENST00000552237 ZNF48Q96MX3 618 aaPredicted RBP4.86□□□□□ -1.63
USP44-207ENST00000552237 ACAP3Q96P50 834 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 WACQ9BTA9 647 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 LANCL2Q9NS86 450 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 C14orf119Q9NWQ9 140 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 COL4A3BPQ9Y5P4 624 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 ATRNL1Q5VV63 1379 aa4.86□□□□□ -1.63
USP44-207ENST00000552237 ALAS1P13196 640 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 TKTP29401 623 aaKnown RBP4.85□□□□□ -1.63
USP44-207ENST00000552237 ALDH1A3P47895 512 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 EVA1CP58658 441 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 CDK17Q00537 523 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 FAM50AQ14320 339 aaKnown RBP4.85□□□□□ -1.63
USP44-207ENST00000552237 FSCN1Q16658 493 aaKnown RBP4.85□□□□□ -1.63
USP44-207ENST00000552237 TMEM119Q4V9L6 283 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 KIAA0895LQ68EN5 471 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 SLC9A4Q6AI14 798 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 VWA1Q6PCB0 445 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.85□□□□□ -1.63
USP44-207ENST00000552237 UBE3BQ7Z3V4 1068 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 PQLC1Q8N2U9 271 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 GPR156Q8NFN8 814 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 DENND1AQ8TEH3 1009 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 STON2Q8WXE9 905 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 TMEM125Q96AQ2 219 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 HAPLN3Q96S86 360 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 QRSL1Q9H0R6 528 aaKnown RBP4.85□□□□□ -1.63
USP44-207ENST00000552237 FBXO34Q9NWN3 711 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 SLC5A4Q9NY91 659 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 PADI4Q9UM07 663 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 PHLDB1Q86UU1 1377 aa4.85□□□□□ -1.63
USP44-207ENST00000552237 AOX1Q06278 1338 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 SRGNP10124 158 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 CDK11BP21127 795 aaKnown RBP4.84□□□□□ -1.63
USP44-207ENST00000552237 ENPP1P22413 925 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 CDKN1CP49918 316 aaPredicted RBP4.84□□□□□ -1.63
USP44-207ENST00000552237 GUCY2FP51841 1108 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 SSBP2P81877 361 aaPredicted RBP4.84□□□□□ -1.63
USP44-207ENST00000552237 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.84□□□□□ -1.63
USP44-207ENST00000552237 RUSC1-AS1Q66K80 236 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 FITM2Q8N6M3 262 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 CNTD1Q8N815 330 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 SEMA6DQ8NFY4 1073 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 NUP133Q8WUM0 1156 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 LMBR1Q8WVP7 490 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 RGMAQ96B86 450 aa4.84□□□□□ -1.63
USP44-207ENST00000552237 ADGRE3Q9BY15 652 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms