RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 HTATSF1O43719 755 aaKnown RBP3.83□□□□□ -1.8
CCNT1-203ENST00000550457 SPDEFO95238 335 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 ADCY5O95622 1261 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 ASMTLO95671 621 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 HKR1P10072 659 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 HSP90B1P14625 803 aaKnown RBP3.83□□□□□ -1.8
CCNT1-203ENST00000550457 MX1P20591 662 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 DDX6P26196 483 aaKnown RBP eCLIP3.83□□□□□ -1.8
CCNT1-203ENST00000550457 AVPR1BP47901 424 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 GUCY1B3Q02153 619 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 APBA1Q02410 837 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 CUL4AQ13619 759 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 BMS1Q14692 1282 aaKnown RBP3.83□□□□□ -1.8
CCNT1-203ENST00000550457 TERF2Q15554 542 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 FAM102AQ5T9C2 384 aaPredicted RBP3.83□□□□□ -1.8
CCNT1-203ENST00000550457 ANKRD45Q5TZF3 282 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.83□□□□□ -1.8
CCNT1-203ENST00000550457 KIF18BQ86Y91 864 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 SLC41A1Q8IVJ1 513 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 RNF169Q8NCN4 708 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 SIMC1Q8NDZ2 872 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 SH3TC2Q8TF17 1288 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 SSH1Q8WYL5 1049 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 API5Q9BZZ5 524 aaKnown RBP3.83□□□□□ -1.8
CCNT1-203ENST00000550457 MAGEC2Q9UBF1 373 aaPredicted RBP3.83□□□□□ -1.8
CCNT1-203ENST00000550457 EVLQ9UI08 416 aaPredicted RBP3.83□□□□□ -1.8
CCNT1-203ENST00000550457 PPP2R3BQ9Y5P8 575 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 V9GYY5 206 aaPredicted RBP3.83□□□□□ -1.8
CCNT1-203ENST00000550457 TRAPPC8Q9Y2L5 1435 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 CLTCL1P53675 1640 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 USP32Q8NFA0 1604 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 MADDQ8WXG6 1647 aa3.83□□□□□ -1.8
CCNT1-203ENST00000550457 KDM5AP29375 1690 aaKnown RBP3.83□□□□□ -1.8
CCNT1-203ENST00000550457 CDC42BPAQ5VT25 1732 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 TRPM2O94759 1503 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 CCDC171Q6TFL3 1326 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 SALL3Q9BXA9 1300 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 DIRC3C9JPN6 131 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 ERC2O15083 957 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 NRP2O60462 931 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 GAS7O60861 476 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 TMEM127O75204 238 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 EGR2P11161 476 aaPredicted RBP3.82□□□□□ -1.8
CCNT1-203ENST00000550457 MPLP40238 635 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 KCNJ4P48050 445 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 GPR15P49685 360 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 UBE2HP62256 183 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 IRX3P78415 501 aaPredicted RBP3.82□□□□□ -1.8
CCNT1-203ENST00000550457 PPARAQ07869 468 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 SCAPQ12770 1279 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 GPS2Q13227 327 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 TRIM25Q14258 630 aaKnown RBP3.82□□□□□ -1.8
CCNT1-203ENST00000550457 CCDC178Q5BJE1 867 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 TEX35Q5T0J7 233 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 GPR158Q5T848 1215 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 TTC22Q5TAA0 569 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 LMBR1LQ6UX01 489 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 ABHD15Q6UXT9 468 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 RPAP2Q8IXW5 612 aaPredicted RBP3.82□□□□□ -1.8
CCNT1-203ENST00000550457 TMEM57Q8N5G2 664 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 CCDC112Q8NEF3 446 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 ZNF397Q8NF99 534 aaPredicted RBP3.82□□□□□ -1.8
CCNT1-203ENST00000550457 CAVIN3Q969G5 261 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 CEP95Q96GE4 821 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 LRFN3Q9BTN0 628 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 DCTPP1Q9H773 170 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 RSAD1Q9HA92 442 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 GEMIN8Q9NWZ8 242 aaKnown RBP3.82□□□□□ -1.8
CCNT1-203ENST00000550457 NOB1Q9ULX3 412 aaKnown RBP3.82□□□□□ -1.8
CCNT1-203ENST00000550457 CLCA2Q9UQC9 943 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 INSL6Q9Y581 213 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.82□□□□□ -1.8
CCNT1-203ENST00000550457 NUMBLQ9Y6R0 609 aa3.82□□□□□ -1.8
CCNT1-203ENST00000550457 ADGRB2O60241 1585 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 ERVK-7P63135 1459 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 PTCH1Q13635 1447 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 SSH2Q76I76 1423 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 RTL1A6NKG5 1358 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 ELP1O95163 1332 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 RAD50Q92878 1312 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 TBKBP1A7MCY6 615 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 B5MCH6 92 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 PRAMEF4O60810 478 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 ESRRBO95718 433 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 TPM1P09493 284 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 LTA4HP09960 611 aaKnown RBP3.81□□□□□ -1.8
CCNT1-203ENST00000550457 CLEC2LP0C7M8 214 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 CCDC192P0DO97 292 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 POU3F2P20265 443 aaPredicted RBP3.81□□□□□ -1.8
CCNT1-203ENST00000550457 XPAP23025 273 aaPredicted RBP3.81□□□□□ -1.8
CCNT1-203ENST00000550457 U2AF2P26368 475 aaKnown RBP eCLIP3.81□□□□□ -1.85e-6■■■□□ 18.3
CCNT1-203ENST00000550457 CXCR5P32302 372 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 TMPOP42166 694 aaKnown RBP3.81□□□□□ -1.8
CCNT1-203ENST00000550457 NRG3P56975 720 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 EXOSC9Q06265 439 aaKnown RBP3.81□□□□□ -1.8
CCNT1-203ENST00000550457 NCBP1Q09161 790 aaKnown RBP3.81□□□□□ -1.8
CCNT1-203ENST00000550457 C21orf62-AS1Q17RA5 79 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 BMT2Q1RMZ1 405 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 MUM1L1Q5H9M0 696 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 MFSD14BQ5SR56 506 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms