RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ZNF445P59923 1031 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 PLCB3Q01970 1234 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 MYL5Q02045 173 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 CAMK1Q14012 370 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 TPD52L1Q16890 204 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-206ENST00000550406 SV2AQ7L0J3 742 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 RNF168Q8IYW5 571 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-206ENST00000550406 FBXO22Q8NEZ5 403 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 HASPINQ8TF76 798 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 ARNTL2Q8WYA1 636 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 ANKRD36BP1Q96IX9 119 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 CNOT6LQ96LI5 555 aaKnown RBP14.09□□□□□ -0.15
RAB5C-206ENST00000550406 COLEC11Q9BWP8 271 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 GPR62Q9BZJ7 368 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 CBX8Q9HC52 389 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 METTL14Q9HCE5 456 aaKnown RBP14.09□□□□□ -0.15
RAB5C-206ENST00000550406 ALG13Q9NP73 1137 aaKnown RBP14.09□□□□□ -0.15
RAB5C-206ENST00000550406 AGAP1Q9UPQ3 857 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 RWDD3Q9Y3V2 267 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 CHD7Q9P2D1 2997 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 TMEM265A0A087WTH1 108 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 I3L4J1 428 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 TNNC2P02585 160 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 TMEM191BP0C7N4 346 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 POLR2BP30876 1174 aaKnown RBP14.08□□□□□ -0.16
RAB5C-206ENST00000550406 FXR1P51114 621 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAB5C-206ENST00000550406 GPM6BQ13491 265 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 GRIN2CQ14957 1233 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 ZACNQ401N2 412 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 CBWD6Q4V339 395 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 TIGD5Q53EQ6 642 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 CBWD3Q5JTY5 395 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 CBWD5Q5RIA9 395 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 ELMO3Q96BJ8 720 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 ADAM28Q9UKQ2 775 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 ITGA11Q9UKX5 1188 aa14.08□□□□□ -0.16
RAB5C-206ENST00000550406 KCNJ18B7U540 433 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 B3GAT3O94766 335 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 ZNF18P17022 549 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 GTF2H1P32780 548 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 AARSP49588 968 aaKnown RBP eCLIP14.07□□□□□ -0.16
RAB5C-206ENST00000550406 AP3M2P53677 418 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 LILRA4P59901 499 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 RBP5P82980 135 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 KCNJ12Q14500 433 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 TCP11X2Q5H9J9 407 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 DCAF17Q5H9S7 520 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-206ENST00000550406 TCERG1LQ5VWI1 586 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 FUT10Q6P4F1 479 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 Q7L0L9 218 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 APTXQ7Z2E3 356 aaKnown RBP14.07□□□□□ -0.16
RAB5C-206ENST00000550406 DDX53Q86TM3 631 aaKnown RBP14.07□□□□□ -0.16
RAB5C-206ENST00000550406 TAS1R2Q8TE23 839 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 GDPD5Q8WTR4 605 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 SEMA4DQ92854 862 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 NAT10Q9H0A0 1025 aaKnown RBP14.07□□□□□ -0.16
RAB5C-206ENST00000550406 XYLT2Q9H1B5 865 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 MMRN2Q9H8L6 949 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 TMEM8AQ9HCN3 771 aa14.07□□□□□ -0.16
RAB5C-206ENST00000550406 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-206ENST00000550406 TADA2AO75478 443 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 HLA-DRAP01903 254 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 KRT19P08727 400 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 ATP1A3P13637 1013 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 PPM1AP35813 382 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 FMO5P49326 533 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 ERVFC1P60507 584 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 MYL6P60660 151 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 KCNH2Q12809 1159 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 MIIPQ5JXC2 388 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 GPR153Q6NV75 609 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 LUZP1Q86V48 1076 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 CREBRFQ8IUR6 639 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 POF1BQ8WVV4 589 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 TMEM169Q96HH4 297 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 B3GALT6Q96L58 329 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 C11orf84Q9BUA3 381 aaPredicted RBP14.06□□□□□ -0.16
RAB5C-206ENST00000550406 TSPY26PQ9H489 355 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 PRDM12Q9H4Q4 367 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 LZTS1Q9Y250 596 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 COQ4Q9Y3A0 265 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 MYO7AQ13402 2215 aa14.06□□□□□ -0.16
RAB5C-206ENST00000550406 CARNS1A5YM72 827 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 M0QZQ0 153 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 FSCN2O14926 492 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 PMM2O15305 246 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 MTIF2P46199 727 aaKnown RBP14.05□□□□□ -0.16
RAB5C-206ENST00000550406 BIRC3Q13489 604 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 NCOA4Q13772 614 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 KRT31Q15323 416 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 ZNF697Q5TEC3 545 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 KIAA0319Q5VV43 1072 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 KRT39Q6A163 491 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 USP37Q86T82 979 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 GAS2L3Q86XJ1 694 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 FAM114A1Q8IWE2 563 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 VPS52Q8N1B4 723 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 LRRC52Q8N7C0 313 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 SUSD3Q96L08 255 aa14.05□□□□□ -0.16
RAB5C-206ENST00000550406 SENP8Q96LD8 212 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms