RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 NUP85Q9BW27 656 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 SLC5A4Q9NY91 659 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 A0A1B0GUA9 196 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 SART1O43290 800 aaKnown RBP10.67□□□□□ -0.7
RAB5B-206ENST00000549505 PSTPIP1O43586 416 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 RPS6KA5O75582 802 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 F2P00734 622 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 SMPD1P17405 629 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 COMTP21964 271 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 OAS2P29728 719 aaKnown RBP10.67□□□□□ -0.7
RAB5B-206ENST00000549505 CBLBQ13191 982 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 TRIM50Q86XT4 487 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 C2orf69Q8N8R5 385 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 FAM114A2Q9NRY5 505 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 SMARCAL1Q9NZC9 954 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 SCINQ9Y6U3 715 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 CEP104O60308 925 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 PHF2O75151 1096 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 HEXIM1O94992 359 aaKnown RBP10.66□□□□□ -0.7
RAB5B-206ENST00000549505 TNFSF9P41273 254 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 INCA1Q0VD86 236 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 ACVR2BQ13705 512 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 XKR4Q5GH76 650 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 TMEM63BQ5T3F8 832 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 SYDE1Q6ZW31 735 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-206ENST00000549505 LIMS2Q7Z4I7 341 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 GPIHBP1Q8IV16 184 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 RBBP8NLQ8NC74 664 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-206ENST00000549505 AFG1LQ8WV93 481 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 PIK3R5Q8WYR1 880 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 KRT12Q99456 494 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 MINDY3Q9H8M7 445 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 CTTNBP2NLQ9P2B4 639 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 SMIM35A0A1B0GVV1 85 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 PROSCO94903 275 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 ITGBL1O95965 494 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-206ENST00000549505 CST3P01034 146 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-206ENST00000549505 GRM5P41594 1212 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 GABRB2P47870 512 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 DCAF4L1Q3SXM0 396 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 ZNF568Q3ZCX4 644 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 FNIP1Q8TF40 1166 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 MAIP1Q8WWC4 291 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 PI4K2AQ9BTU6 479 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 SUGCTQ9HAC7 445 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 MRPL47Q9HD33 250 aaKnown RBP10.66□□□□□ -0.7
RAB5B-206ENST00000549505 SIX4Q9UIU6 781 aa10.66□□□□□ -0.7
RAB5B-206ENST00000549505 COL4A4P53420 1690 aaPredicted RBP10.66□□□□□ -0.7
RAB5B-206ENST00000549505 MANSC4A6NHS7 340 aaPredicted RBP10.65□□□□□ -0.7
RAB5B-206ENST00000549505 ZEB2O60315 1214 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 FAM163BP0C2L3 166 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 AXLP30530 894 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 ZBTB6Q15916 424 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 ALKAL1Q6UXT8 129 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 DNAAF5Q86Y56 855 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 KATNAL2Q8IYT4 538 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 ZNF653Q96CK0 615 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 DDX27Q96GQ7 796 aaKnown RBP10.65□□□□□ -0.7
RAB5B-206ENST00000549505 ZDHHC18Q9NUE0 388 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 CNOT8Q9UFF9 292 aaKnown RBP10.65□□□□□ -0.7
RAB5B-206ENST00000549505 KRIT1O00522 736 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 GPR32O75388 356 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 ZNF865P0CJ78 1059 aaPredicted RBP10.65□□□□□ -0.7
RAB5B-206ENST00000549505 TMOD1P28289 359 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 CYP2C19P33261 490 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 INHBEP58166 350 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 MAMLD1Q13495 774 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 DGKDQ16760 1214 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 DRICH1Q6PGQ1 229 aaPredicted RBP10.65□□□□□ -0.7
RAB5B-206ENST00000549505 C17orf99Q6UX52 265 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 KIAA0319LQ8IZA0 1049 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 NPLOC4Q8TAT6 608 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 ZNF606Q8WXB4 792 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 ITGA11Q9UKX5 1188 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 KIAA1257Q9ULG3 409 aa10.65□□□□□ -0.7
RAB5B-206ENST00000549505 GOLGA8KD6RF30 607 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 H0YGN5 161 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 GPR25O00155 361 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 PODXLO00592 558 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 TSPAN1O60635 241 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 CALB1P05937 261 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 ABCB4P21439 1286 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 RWDD2BP57060 319 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 MAP2K5Q13163 448 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 KLF1Q13351 362 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-206ENST00000549505 TAZQ16635 292 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 LIN9Q5TKA1 542 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 CST9Q5W186 159 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 EEF1DP3Q658K8 133 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 SLC13A5Q86YT5 568 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-206ENST00000549505 RASAL3Q86YV0 1011 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 RHPN2Q8IUC4 686 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 PRELID2Q8N945 189 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 ANKRD36BP1Q96IX9 119 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 RAB17Q9H0T7 212 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-206ENST00000549505 EFR3BQ9Y2G0 817 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 NEU2Q9Y3R4 380 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 NFS1Q9Y697 457 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 NRCAMQ92823 1304 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms