RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 ZC3H10Q96K80 434 aaKnown RBP5.09□□□□□ -1.59
PTCH1-216ENST00000548379 MSLNLQ96KJ4 702 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 CPEB1Q9BZB8 566 aaKnown RBP5.09□□□□□ -1.59
PTCH1-216ENST00000548379 ADAM7Q9H2U9 754 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 GPR35Q9HC97 309 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 FBXO34Q9NWN3 711 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 PIH1D1Q9NWS0 290 aaKnown RBP5.09□□□□□ -1.59
PTCH1-216ENST00000548379 RTEL1Q9NZ71 1219 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 COMMD10Q9Y6G5 202 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 OTOL1A6NHN0 477 aaPredicted RBP5.08□□□□□ -1.6
PTCH1-216ENST00000548379 RASA4BC9J798 803 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 FOXN3O00409 490 aaPredicted RBP5.08□□□□□ -1.6
PTCH1-216ENST00000548379 GPR42O15529 346 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 RASA4O43374 803 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 FOXS1O43638 330 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 LDHAP00338 332 aaKnown RBP5.08□□□□□ -1.6
PTCH1-216ENST00000548379 ANXA1P04083 346 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 MYL3P08590 195 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 ZSCAN22P10073 491 aaPredicted RBP5.08□□□□□ -1.6
PTCH1-216ENST00000548379 KITP10721 976 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 HDCP19113 662 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 PRIM2P49643 509 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 SOX8P57073 446 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 UBXN2BQ14CS0 331 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 CNGA2Q16280 664 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 LONRF1Q17RB8 773 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 KHDC1LQ5JSQ8 128 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 C1QL3Q5VWW1 255 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 FUKQ8N0W3 1084 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 PARD3BQ8TEW8 1205 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 ST8SIA2Q92186 375 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 PGBD4Q96DM1 585 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 SUCLG2Q96I99 432 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 SGCZQ96LD1 299 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 TBCBQ99426 244 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 MYD88Q99836 296 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 SMURF2Q9HAU4 748 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 NLRC4Q9NPP4 1024 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.08□□□□□ -1.6
PTCH1-216ENST00000548379 FNIP2Q9P278 1114 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 RGS17Q9UGC6 210 aaPredicted RBP5.08□□□□□ -1.6
PTCH1-216ENST00000548379 TAGLN3Q9UI15 199 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 CPA4Q9UI42 421 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 CLCA2Q9UQC9 943 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 RIPOR2Q9Y4F9 1068 aa5.08□□□□□ -1.6
PTCH1-216ENST00000548379 SOGA1O94964 1423 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 TDRD9Q8NDG6 1382 aaKnown RBP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 PLEKHD1A6NEE1 506 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 PATE3B3GLJ2 98 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 KIAA0391O15091 583 aaKnown RBP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 HAUS5O94927 633 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 POMCP01189 267 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 ALAS1P13196 640 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 ZKSCAN1P17029 563 aaPredicted RBP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 BMP7P18075 431 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 SLC7A1P30825 629 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 EXOSC9Q06265 439 aaKnown RBP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 ZNF543Q08ER8 600 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 TCF15Q12870 199 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 IFIT5Q13325 482 aaKnown RBP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 OS9Q13438 667 aaPredicted RBP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 LONRF3Q496Y0 759 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 DCAF17Q5H9S7 520 aaPredicted RBP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 ATXN7L2Q5T6C5 722 aaPredicted RBP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 METRNLQ641Q3 311 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 NAIF1Q69YI7 327 aaPredicted RBP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 UBE3BQ7Z3V4 1068 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 DPP9Q86TI2 863 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 SESTD1Q86VW0 696 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 ZFPM1Q8IX07 1006 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 DNERQ8NFT8 737 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 ZFP28Q8NHY6 868 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 MAML1Q92585 1016 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 NMD3Q96D46 503 aaKnown RBP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 TMEM176AQ96HP8 235 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 OR14A2Q96R54 314 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 RBM15Q96T37 977 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 PACSIN1Q9BY11 444 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 UNKQ9C0B0 810 aaKnown RBP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 KIAA1586Q9HCI6 787 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 CNNM1Q9NRU3 951 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 STK32BQ9NY57 414 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 CFAP97Q9P2B7 532 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 ZFR2Q9UPR6 939 aaKnown RBP5.07□□□□□ -1.6
PTCH1-216ENST00000548379 ARAP1Q96P48 1450 aa5.07□□□□□ -1.6
PTCH1-216ENST00000548379 NPEPPSL1A6NEC2 478 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 RHPN2P1A8MT19 583 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 PRICKLE3O43900 615 aaPredicted RBP5.06□□□□□ -1.6
PTCH1-216ENST00000548379 DNAJB5O75953 348 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 IPO13O94829 963 aaKnown RBP5.06□□□□□ -1.6
PTCH1-216ENST00000548379 ABHD16AO95870 558 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 GJB1P08034 283 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 RARBP10826 455 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 GNAT2P19087 354 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 MSX2P35548 267 aaPredicted RBP5.06□□□□□ -1.6
PTCH1-216ENST00000548379 RABGGTBP53611 331 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 SUMO3P55854 103 aaPredicted RBP5.06□□□□□ -1.6
PTCH1-216ENST00000548379 RAP2BP61225 183 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 ELAVL1Q15717 326 aaKnown RBP5.06□□□□□ -1.6
PTCH1-216ENST00000548379 SPTY2D1Q68D10 685 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms