RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ZBTB44Q8NCP5 570 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 TTC8Q8TAM2 541 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 FAM3CQ92520 227 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 DDX12PQ92771 950 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 TBC1D32Q96NH3 1257 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 CNTNAP3BQ96NU0 1288 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 PGLYRP2Q96PD5 576 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 PLIN2Q99541 437 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 CNTNAP3Q9BZ76 1288 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 ZNF334Q9HCZ1 680 aaPredicted RBP13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 SLC38A7Q9NVC3 462 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 CEP72Q9P209 647 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 GPR179Q6PRD1 2367 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 CEP250Q9BV73 2442 aa13.08□□□□□ -0.32
TRAFD1-205ENST00000548277 DMXL1Q9Y485 3027 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 MAN2B1O00754 1011 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 MEFVO15553 781 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 TBC1D4O60343 1298 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 CENPBP07199 599 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 OR4Q2P0C623 313 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 CCNE1P24864 410 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 MARCKSP29966 332 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 RPS9P46781 194 aaKnown RBP13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 SPEM2Q0P670 501 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 PTGDRQ13258 359 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 DMP1Q13316 513 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 TEAD2Q15562 447 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 XKR4Q5GH76 650 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 PRR23BQ6ZRT6 265 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 RTL10Q7L3V2 364 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 TCEAL8Q8IYN2 117 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 DAW1Q8N136 415 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 C4orf32Q8N8J7 132 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 FAM184AQ8NB25 1140 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 ZSCAN18Q8TBC5 510 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 ASB16Q96NS5 453 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 RUSC1Q9BVN2 902 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 FOXP1Q9H334 677 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 SLITRK6Q9H5Y7 841 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 TMEM134Q9H6X4 195 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 PTPRHQ9HD43 1115 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 PARD6AQ9NPB6 346 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 ANKFY1Q9P2R3 1169 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 GMEB2Q9UKD1 530 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 NOL7Q9UMY1 257 aaKnown RBP13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 DNM3Q9UQ16 869 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 PCDHB6Q9Y5E3 794 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 COL4A2P08572 1712 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 PHLPP2Q6ZVD8 1323 aa13.07□□□□□ -0.32
TRAFD1-205ENST00000548277 ZNF263O14978 683 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 SYN3O14994 580 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 LILRB5O75023 590 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 MOSPD3O75425 235 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 MCF2P10911 925 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 PSMC3P17980 439 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 MUTP22033 750 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 SOX9P48436 509 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.324e-6■■■■□ 26.3
TRAFD1-205ENST00000548277 MRPL58Q14197 206 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 SLC10A6Q3KNW5 377 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 RINT1Q6NUQ1 792 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 MPZL3Q6UWV2 235 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 KCNK18Q7Z418 384 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 YAF2Q8IY57 180 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 DNASE1L2Q92874 299 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 SMARCD2Q92925 531 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 IRF7Q92985 503 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 EPC1Q9H2F5 836 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 AVENQ9NQS1 362 aaPredicted RBP13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 RBM12Q9NTZ6 932 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 TUBGCP4Q9UGJ1 667 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 CDV3Q9UKY7 258 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 RAB23Q9ULC3 237 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 PIAS3Q9Y6X2 628 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 NCANO14594 1321 aa13.06□□□□□ -0.32
TRAFD1-205ENST00000548277 SCN1AP35498 2009 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 SPTBN2O15020 2390 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 HEPACAM2A8MVW5 462 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 ABLIM1O14639 778 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 KCNE1P15382 129 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 RPL9P32969 192 aaKnown RBP13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 GUCY2FP51841 1108 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 KPNA1P52294 538 aaPredicted RBP13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 SATB1Q01826 763 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 CACNB1Q02641 598 aaPredicted RBP13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 STRN3Q13033 797 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 SRSF5Q13243 272 aaKnown RBP13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 PDIA5Q14554 519 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 IL17AQ16552 155 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 KRT79Q5XKE5 535 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 TPGS2Q68CL5 300 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 HEATR6Q6AI08 1181 aaKnown RBP13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 ZNF280DQ6N043 979 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 C1orf186Q6ZWK4 172 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 MAP4K3Q8IVH8 894 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 GPR161Q8N6U8 529 aaKnown RBP13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 APPL2Q8NEU8 664 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 CSGALNACT1Q8TDX6 532 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 NELL1Q92832 810 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 SUSD3Q96L08 255 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms