RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 SLC13A5Q86YT5 568 aaPredicted RBP10.38□□□□□ -0.75
TRAF1-203ENST00000546084 GPD1LQ8N335 351 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 FLAD1Q8NFF5 587 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 RILPQ96NA2 401 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 PDCD2LQ9BRP1 358 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ELP3Q9H9T3 547 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ZNF302Q9NR11 478 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 PIM2Q9P1W9 311 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 TBX3O15119 743 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ENTPD3O75355 529 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 SUN1O94901 812 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ATP6V1G2O95670 118 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 GCKP35557 465 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 NRLP54845 237 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ACTR2P61160 394 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ELF3P78545 371 aaPredicted RBP10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ADCY2Q08462 1091 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 R3HDM1Q15032 1099 aaKnown RBP10.38□□□□□ -0.75
TRAF1-203ENST00000546084 RBBP8NLQ8NC74 664 aaPredicted RBP10.38□□□□□ -0.75
TRAF1-203ENST00000546084 PPP1R36Q96LQ0 422 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 RBM15Q96T37 977 aaKnown RBP eCLIP10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ZSWIM1Q9BR11 485 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 TBC1D22BQ9NU19 505 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ABCF3Q9NUQ8 709 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 GPATCH2LQ9NWQ4 482 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 COL4A1P02462 1669 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ROBO1Q9Y6N7 1651 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 DIAPH2O60879 1101 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 UBOX5O94941 541 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 NCOA4Q13772 614 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 MIS18BP1Q6P0N0 1132 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 CCT6BQ92526 530 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 GMCL1Q96IK5 515 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 PITPNM3Q9BZ71 974 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 GGA2Q9UJY4 613 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 SUGT1Q9Y2Z0 365 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 CFHP08603 1231 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 KIF22Q14807 665 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 LY6KQ17RY6 165 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 Q4G0T1 1027 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 DARS2Q6PI48 645 aaKnown RBP10.37□□□□□ -0.75
TRAF1-203ENST00000546084 CCDC60Q8IWA6 550 aaPredicted RBP10.37□□□□□ -0.75
TRAF1-203ENST00000546084 DCLK2Q8N568 766 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 C3orf20Q8ND61 904 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 NLRP7Q8WX94 980 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 TGS1Q96RS0 853 aaKnown RBP10.37□□□□□ -0.75
TRAF1-203ENST00000546084 KDM4CQ9H3R0 1056 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 ECT2Q9H8V3 914 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 MCM8Q9UJA3 840 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 MYH3P11055 1940 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 CASZ1Q86V15 1759 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 CES2O00748 559 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 PPP1R12AO14974 1030 aaPredicted RBP10.37□□□□□ -0.75
TRAF1-203ENST00000546084 CIITAP33076 1130 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 COILP38432 576 aaPredicted RBP10.37□□□□□ -0.75
TRAF1-203ENST00000546084 PTENP60484 403 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 PSMC1P62191 440 aaKnown RBP10.37□□□□□ -0.75
TRAF1-203ENST00000546084 ZNF699Q32M78 642 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 KDELC2Q7Z4H8 507 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 SCYL3Q8IZE3 742 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 NME8Q8N427 588 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 CCNYQ8ND76 341 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 BSNDQ8WZ55 320 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 P3H4Q92791 437 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 SHCBP1LQ9BZQ2 653 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 CDC42EP4Q9H3Q1 356 aaKnown RBP10.37□□□□□ -0.75
TRAF1-203ENST00000546084 KIF9Q9HAQ2 790 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 PARP2Q9UGN5 583 aa10.37□□□□□ -0.75
TRAF1-203ENST00000546084 PARP4Q9UKK3 1724 aaKnown RBP10.37□□□□□ -0.75
TRAF1-203ENST00000546084 SLC16A3O15427 465 aaKnown RBP10.36□□□□□ -0.75
TRAF1-203ENST00000546084 RNF8O76064 485 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 ANP32DO95626 131 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 CCNE2O96020 404 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 ICAM1P05362 532 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 PDGFRBP09619 1106 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 PCK1P35558 622 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 CHKAP35790 457 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 CPA2P48052 419 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 CLK2P49760 499 aaKnown RBP10.36□□□□□ -0.75
TRAF1-203ENST00000546084 RPL7AP62424 266 aaKnown RBP10.36□□□□□ -0.75
TRAF1-203ENST00000546084 MRPS9P82933 396 aaKnown RBP10.36□□□□□ -0.75
TRAF1-203ENST00000546084 EMC2Q15006 297 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 SLC15A2Q16348 729 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 ZBTB8OSQ8IWT0 167 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 RTKN2Q8IZC4 609 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 PRELID2Q8N945 189 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 CERKQ8TCT0 537 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 PYROXD1Q8WU10 500 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 KREMEN1Q96MU8 473 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 OSBPL8Q9BZF1 889 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 CARD9Q9H257 536 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 AGO4Q9HCK5 861 aaKnown RBP10.36□□□□□ -0.75
TRAF1-203ENST00000546084 SEL1LQ9UBV2 794 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 CYP3A7-CYP3A51PA0A087WV96 503 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 IGF2BP3O00425 579 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRAF1-203ENST00000546084 PHF2O75151 1096 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 TNNC2P02585 160 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 CHRNA3P32297 505 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 BAG6P46379 1132 aa10.36□□□□□ -0.75
TRAF1-203ENST00000546084 NT5C2P49902 561 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms