RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SBK3P0C264 359 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 CDKN1CP49918 316 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-224ENST00000545688 GUCY2FP51841 1108 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 SLC16A1P53985 500 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 MTMR1Q13613 665 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-224ENST00000545688 RD3Q7Z3Z2 195 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 NLGN4YQ8NFZ3 816 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-224ENST00000545688 SLC9A6Q92581 669 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 HDAC10Q969S8 669 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 PTCD3Q96EY7 689 aaKnown RBP6.34□□□□□ -1.39
SNHG1-224ENST00000545688 AIFM2Q9BRQ8 373 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 TLR10Q9BXR5 811 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 CCDC8Q9H0W5 538 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-224ENST00000545688 LIMCH1Q9UPQ0 1083 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 IPPQ9Y573 584 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 INSL6Q9Y581 213 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 KLHL33A6NCF5 533 aa6.33□□□□□ -1.4
SNHG1-224ENST00000545688 MYADML2A6NDP7 307 aa6.33□□□□□ -1.4
SNHG1-224ENST00000545688 FZD9O00144 591 aa6.33□□□□□ -1.4
SNHG1-224ENST00000545688 HTRA2O43464 458 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-224ENST00000545688 CDK11BP21127 795 aaKnown RBP6.33□□□□□ -1.4
SNHG1-224ENST00000545688 EDNRBP24530 442 aa6.33□□□□□ -1.4
SNHG1-224ENST00000545688 ITKQ08881 620 aa6.33□□□□□ -1.4
SNHG1-224ENST00000545688 IL10RAQ13651 578 aa6.33□□□□□ -1.4
SNHG1-224ENST00000545688 ZNF169Q14929 603 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-224ENST00000545688 C3orf36Q3SXR2 165 aa6.33□□□□□ -1.4
SNHG1-224ENST00000545688 RNF187Q5TA31 235 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-224ENST00000545688 Q8NA96 180 aa6.33□□□□□ -1.4
SNHG1-224ENST00000545688 TEKT5Q96M29 485 aa6.33□□□□□ -1.4
SNHG1-224ENST00000545688 MED15Q96RN5 788 aa6.33□□□□□ -1.4
SNHG1-224ENST00000545688 NISCHQ9Y2I1 1504 aa6.33□□□□□ -1.4
SNHG1-224ENST00000545688 SPATA31A6Q5VVP1 1343 aa6.32□□□□□ -1.4
SNHG1-224ENST00000545688 MGST3O14880 152 aa6.32□□□□□ -1.4
SNHG1-224ENST00000545688 KATNA1O75449 491 aa6.32□□□□□ -1.4
SNHG1-224ENST00000545688 AGFG2O95081 481 aa6.32□□□□□ -1.4
SNHG1-224ENST00000545688 ZNF280AP59817 542 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-224ENST00000545688 SIM1P81133 766 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-224ENST00000545688 KIF23Q02241 960 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-224ENST00000545688 FAM50AQ14320 339 aaKnown RBP6.32□□□□□ -1.4
SNHG1-224ENST00000545688 PCBP2Q15366 365 aaKnown RBP eCLIP6.32□□□□□ -1.4
SNHG1-224ENST00000545688 PABPC1LQ4VXU2 614 aaKnown RBP6.32□□□□□ -1.4
SNHG1-224ENST00000545688 FBXO42Q6P3S6 717 aa6.32□□□□□ -1.4
SNHG1-224ENST00000545688 COLGALT2Q8IYK4 626 aa6.32□□□□□ -1.4
SNHG1-224ENST00000545688 SSH3Q8TE77 659 aa6.32□□□□□ -1.4
SNHG1-224ENST00000545688 VOPP1Q96AW1 172 aa6.32□□□□□ -1.4
SNHG1-224ENST00000545688 MTMR8Q96EF0 704 aa6.32□□□□□ -1.4
SNHG1-224ENST00000545688 KCTD5Q9NXV2 234 aa6.32□□□□□ -1.4
SNHG1-224ENST00000545688 TLK1Q9UKI8 766 aa6.32□□□□□ -1.4
SNHG1-224ENST00000545688 CDYLQ9Y232 598 aa6.32□□□□□ -1.4
SNHG1-224ENST00000545688 TRGV11A0A075B6L2 103 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 CCDC154A6NI56 674 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 GABRDO14764 452 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 SGTAO43765 313 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 CD1AP06126 327 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 MTHFD1P11586 935 aaKnown RBP6.31□□□□□ -1.4
SNHG1-224ENST00000545688 MRPS35P82673 323 aaKnown RBP6.31□□□□□ -1.4
SNHG1-224ENST00000545688 AMPD3Q01432 767 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 CCDC142Q17RM4 750 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 FLYWCH1Q4VC44 716 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 UTP14CQ5TAP6 766 aaKnown RBP6.31□□□□□ -1.4
SNHG1-224ENST00000545688 LNX2Q8N448 690 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 FAM98AQ8NCA5 519 aaKnown RBP6.31□□□□□ -1.4
SNHG1-224ENST00000545688 CAGE1Q8TC20 777 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 KAT5Q92993 513 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 MRGPRX4Q96LA9 322 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 VSX1Q9NZR4 365 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-224ENST00000545688 FOXJ2Q9P0K8 574 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 LRIT1Q9P2V4 623 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 COX11Q9Y6N1 276 aa6.31□□□□□ -1.4
SNHG1-224ENST00000545688 SHTN1A0MZ66 631 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 MASP2O00187 686 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 ZNF362Q5T0B9 420 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-224ENST00000545688 BOLLQ8N9W6 283 aaKnown RBP6.3□□□□□ -1.4
SNHG1-224ENST00000545688 PRPF38AQ8NAV1 312 aaKnown RBP6.3□□□□□ -1.4
SNHG1-224ENST00000545688 IL17RDQ8NFM7 739 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 ACTRT2Q8TDY3 377 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 COA7Q96BR5 231 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 CLPTM1LQ96KA5 538 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 DUSP26Q9BV47 211 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 PACSIN1Q9BY11 444 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 RSAD1Q9HA92 442 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 KIAA1586Q9HCI6 787 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-224ENST00000545688 SERPINB13Q9UIV8 391 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 DMTF1Q9Y222 760 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 PCDHB1Q9Y5F3 818 aa6.3□□□□□ -1.4
SNHG1-224ENST00000545688 C21orf58P58505 322 aa6.29□□□□□ -1.4
SNHG1-224ENST00000545688 EVA1CP58658 441 aa6.29□□□□□ -1.4
SNHG1-224ENST00000545688 MRPS21P82921 87 aaKnown RBP6.29□□□□□ -1.4
SNHG1-224ENST00000545688 TLE1Q04724 770 aa6.29□□□□□ -1.4
SNHG1-224ENST00000545688 RAB39AQ14964 217 aa6.29□□□□□ -1.4
SNHG1-224ENST00000545688 SF3B3Q15393 1217 aaKnown RBP6.29□□□□□ -1.4
SNHG1-224ENST00000545688 SYCE2Q6PIF2 218 aa6.29□□□□□ -1.4
SNHG1-224ENST00000545688 GADL1Q6ZQY3 521 aa6.29□□□□□ -1.4
SNHG1-224ENST00000545688 TMEM125Q96AQ2 219 aa6.29□□□□□ -1.4
SNHG1-224ENST00000545688 KLHL32Q96NJ5 620 aa6.29□□□□□ -1.4
SNHG1-224ENST00000545688 LRFN3Q9BTN0 628 aa6.29□□□□□ -1.4
SNHG1-224ENST00000545688 JKAMPQ9P055 326 aa6.29□□□□□ -1.4
SNHG1-224ENST00000545688 SLC45A2Q9UMX9 530 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms