RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 SCLYQ96I15 445 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 CCDC42Q96M95 316 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 ZNF560Q96MR9 790 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 KREMEN1Q96MU8 473 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 ZMAT2Q96NC0 199 aaKnown RBP14.8□□□□□ -0.04
SCARB1-209ENST00000545305 WNT8AQ9H1J5 351 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 APOBEC3GQ9HC16 384 aaKnown RBP14.8□□□□□ -0.04
SCARB1-209ENST00000545305 TUBGCP4Q9UGJ1 667 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 NUB1Q9Y5A7 615 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 SSU72P8A0A1W2PR75 194 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 ARL5CA6NH57 179 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 ESPNB1AK53 854 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 C9IYK1 514 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 STAU1O95793 577 aaKnown RBP14.79□□□□□ -0.04
SCARB1-209ENST00000545305 EOMESO95936 686 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 CXCL10P02778 98 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 KRT5P13647 590 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 ANXA13P27216 316 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 PRKCIP41743 596 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 GUCY2FP51841 1108 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 TNNC1P63316 161 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 ZBTB6Q15916 424 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 RAD9BQ6WBX8 426 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 AGMOQ6ZNB7 445 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 VPS36Q86VN1 386 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 LRRC52Q8N7C0 313 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 DBF4BQ8NFT6 615 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 KIAA1524Q8TCG1 905 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 KAT5Q92993 513 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 C18orf25Q96B23 403 aaPredicted RBP14.79□□□□□ -0.04
SCARB1-209ENST00000545305 ELMO3Q96BJ8 720 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 HPDLQ96IR7 371 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 FAXDC2Q96IV6 333 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 ZFP42Q96MM3 310 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 GAD1Q99259 594 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 CHP1Q99653 195 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 GPR88Q9GZN0 384 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 XYLT2Q9H1B5 865 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 CXCL16Q9H2A7 254 aa14.79□□□□□ -0.04
SCARB1-209ENST00000545305 NHEJ1Q9H9Q4 299 aaPredicted RBP14.79□□□□□ -0.04
SCARB1-209ENST00000545305 PRDM5Q9NQX1 630 aaPredicted RBP14.79□□□□□ -0.04
SCARB1-209ENST00000545305 RNF216Q9NWF9 866 aaPredicted RBP14.79□□□□□ -0.04
SCARB1-209ENST00000545305 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.79□□□□□ -0.04
SCARB1-209ENST00000545305 KIAA0100Q14667 2235 aaKnown RBP14.78□□□□□ -0.04
SCARB1-209ENST00000545305 TRIP11Q15643 1979 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 FOXN3O00409 490 aaPredicted RBP14.78□□□□□ -0.04
SCARB1-209ENST00000545305 PTGESO14684 152 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 AKR1B10O60218 316 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 EVI5O60447 810 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 THP07101 528 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 PNMA6AP0CW24 399 aaPredicted RBP14.78□□□□□ -0.04
SCARB1-209ENST00000545305 EIF4A3P38919 411 aaKnown RBP14.78□□□□□ -0.04
SCARB1-209ENST00000545305 PNPLA4P41247 253 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 MAPK8IP2Q13387 824 aaPredicted RBP14.78□□□□□ -0.04
SCARB1-209ENST00000545305 SMYD5Q6GMV2 418 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 GLB1LQ6UWU2 654 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 SCARA5Q6ZMJ2 495 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 ZNF598Q86UK7 904 aaKnown RBP14.78□□□□□ -0.04
SCARB1-209ENST00000545305 FAM71AQ8IYT1 594 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 URGCPQ8TCY9 931 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 LINC01599Q8WXQ3 324 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 PPP1R10Q96QC0 940 aaKnown RBP14.78□□□□□ -0.04
SCARB1-209ENST00000545305 VRTNQ9H8Y1 702 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 ARHGAP20Q9P2F6 1191 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 NXF1Q9UBU9 619 aaKnown RBP14.78□□□□□ -0.04
SCARB1-209ENST00000545305 PCDHB4Q9Y5E5 795 aa14.78□□□□□ -0.04
SCARB1-209ENST00000545305 MEIS3P2A8K0S8 358 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 ZSCAN12O43309 604 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 NDUFA10O95299 355 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 CCDC175P0C221 793 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 EN2P19622 333 aaPredicted RBP14.77□□□□□ -0.05
SCARB1-209ENST00000545305 PDE6CP51160 858 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 SCNN1GP51170 649 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 KIF11P52732 1056 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 FAM189BP81408 668 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 GRIK3Q13003 919 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 MTF1Q14872 753 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 GPNMBQ14956 572 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 SPA17Q15506 151 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 WDR72Q3MJ13 1102 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 C9orf57Q5W0N0 161 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 HGSNATQ68CP4 663 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 CNKSR3Q6P9H4 555 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 TOGARAM2Q6ZUX3 1019 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 IRF2BP2Q7Z5L9 587 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 DEFB128Q7Z7B8 93 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 RTN4RL1Q86UN2 441 aaPredicted RBP14.77□□□□□ -0.05
SCARB1-209ENST00000545305 CXorf38Q8TB03 319 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 ARID3AQ99856 593 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 HAUS4Q9H6D7 363 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 ELAC1Q9H777 363 aaKnown RBP14.77□□□□□ -0.05
SCARB1-209ENST00000545305 RNF19AQ9NV58 838 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 TMEM161AQ9NX61 479 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 LRFN2Q9ULH4 789 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 INPP5FQ9Y2H2 1132 aa14.77□□□□□ -0.05
SCARB1-209ENST00000545305 EPN1Q9Y6I3 576 aaPredicted RBP14.77□□□□□ -0.05
SCARB1-209ENST00000545305 ANO9A1A5B4 782 aa14.76□□□□□ -0.05
SCARB1-209ENST00000545305 EIF3CLB5ME19 914 aaKnown RBP14.76□□□□□ -0.05
SCARB1-209ENST00000545305 RBAK-RBAKDNI3L0D1 243 aa14.76□□□□□ -0.05
SCARB1-209ENST00000545305 KIAA0355O15063 1070 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms