RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 MYL1P05976 194 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 THP07101 528 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 HTR4Q13639 388 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 KMT5BQ4FZB7 885 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 ZC2HC1CQ53FD0 456 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-206ENST00000544964 NT5DC1Q5TFE4 455 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 FAM171A1Q5VUB5 890 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 GET4Q7L5D6 327 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-206ENST00000544964 ASCL5Q7RTU5 278 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 HAUS6Q7Z4H7 955 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 CCDC105Q8IYK2 499 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 SLC44A3Q8N4M1 653 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 TMEM161BQ8NDZ6 487 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 LNX1Q8TBB1 728 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-206ENST00000544964 NTPCRQ9BSD7 190 aaKnown RBP13.6□□□□□ -0.23
ACTN1-206ENST00000544964 TTPALQ9BTX7 342 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 MRPL44Q9H9J2 332 aaKnown RBP13.6□□□□□ -0.23
ACTN1-206ENST00000544964 ARHGAP28Q9P2N2 729 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 FBXL21Q9UKT6 434 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 MIA3Q5JRA6 1907 aa13.6□□□□□ -0.23
ACTN1-206ENST00000544964 GPR179Q6PRD1 2367 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 PRR23AA6NEV1 266 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 ANHXE9PGG2 379 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 TMEM189-UBE2V1I3L0A0 370 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 K7ERI5 159 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 CFHP08603 1231 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 MAPTP10636 758 aaKnown RBP13.59□□□□□ -0.23
ACTN1-206ENST00000544964 LAMP2P13473 410 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 CASP5P51878 434 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 EFNA5P52803 228 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 PSMD5Q16401 504 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 TMEM132AQ24JP5 1023 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 DCAF4L1Q3SXM0 396 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 GLRA4Q5JXX5 417 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 CD300LGQ6UXG3 332 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 TAS1R3Q7RTX0 852 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 GLIS3Q8NEA6 775 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 PPP1R10Q96QC0 940 aaKnown RBP13.59□□□□□ -0.23
ACTN1-206ENST00000544964 ADPGKQ9BRR6 497 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 CLSTN2Q9H4D0 955 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 EXOC1Q9NV70 894 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 SEL1LQ9UBV2 794 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 KCNG1Q9UIX4 513 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 HOOK1Q9UJC3 728 aaKnown RBP13.59□□□□□ -0.23
ACTN1-206ENST00000544964 GDAQ9Y2T3 454 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 PCDHA5Q9Y5H7 936 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 PHLPP2Q6ZVD8 1323 aa13.59□□□□□ -0.23
ACTN1-206ENST00000544964 FRYLO94915 3013 aa13.58□□□□□ -0.23
ACTN1-206ENST00000544964 DMXL1Q9Y485 3027 aa13.58□□□□□ -0.23
ACTN1-206ENST00000544964 CEP250Q9BV73 2442 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 SMC2O95347 1197 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 GCNT3O95395 438 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 MBD3O95983 291 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 SRFP11831 508 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 FGFR3P22607 806 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 EHHADHQ08426 723 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 FAM26FQ5R3K3 315 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 ATF7IP2Q5U623 682 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-206ENST00000544964 ZNF720Q7Z2F6 126 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 FRMD5Q7Z6J6 570 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 CEP57Q86XR8 500 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 ELOA2Q8IYF1 753 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-206ENST00000544964 CEP120Q8N960 986 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 C3orf58Q8NDZ4 430 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 ST13P5Q8NFI4 369 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-206ENST00000544964 SMARCE1Q969G3 411 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 TMEM134Q9H6X4 195 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 PIDD1Q9HB75 910 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 SLC39A2Q9NP94 309 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 OLFML3Q9NRN5 406 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.58□□□□□ -0.24
ACTN1-206ENST00000544964 WNT16Q9UBV4 365 aa13.58□□□□□ -0.24
ACTN1-206ENST00000544964 PATJQ8NI35 1801 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 H0YCG3 227 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 ABLIM1O14639 778 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 PRPF6O94906 941 aaKnown RBP13.57□□□□□ -0.24
ACTN1-206ENST00000544964 C8AP07357 584 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 HNRNPA1P09651 372 aaKnown RBP eCLIP13.57□□□□□ -0.24
ACTN1-206ENST00000544964 HOXA9P31269 272 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 NTHL1P78549 312 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 GTF2BQ00403 316 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 SOX4Q06945 474 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-206ENST00000544964 ELAVL2Q12926 359 aaKnown RBP13.57□□□□□ -0.24
ACTN1-206ENST00000544964 STRN3Q13033 797 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 STK4Q13043 487 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 ISM2Q6H9L7 571 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 RSPO2Q6UXX9 243 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-206ENST00000544964 GRASPQ7Z6J2 395 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-206ENST00000544964 GPR152Q8TDT2 470 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 NXPE3Q969Y0 559 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 CCDC47Q96A33 483 aaKnown RBP13.57□□□□□ -0.24
ACTN1-206ENST00000544964 NUP62CLQ9H1M0 184 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 CDT1Q9H211 546 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 IKZF4Q9H2S9 585 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 TBC1D17Q9HA65 648 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 PTPRHQ9HD43 1115 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 MTRRQ9UBK8 725 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 CA14Q9ULX7 337 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms