RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PTPAQ15257 358 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 TRABDQ9H4I3 376 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 WDR35Q9P2L0 1181 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.48□□□□□ -0.25
CHD4-211ENST00000544484 SYNDIG1LA6NDD5 238 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 E2F6O75461 281 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 CASP4P49662 377 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 DDIASQ8IXT1 998 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 FAM161BQ96MY7 647 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 AGPAT3Q9NRZ7 376 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 ARP10275 920 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 ITGA4P13612 1032 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 CD44P16070 742 aaKnown RBP13.47□□□□□ -0.25
CHD4-211ENST00000544484 TAL1P17542 331 aaPredicted RBP13.47□□□□□ -0.25
CHD4-211ENST00000544484 GLRA4Q5JXX5 417 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 ANKRD13AQ8IZ07 590 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 C4orf33Q8N1A6 199 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 E2F8A0AVK6 867 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 EXTL3O43909 919 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 NPTXRO95502 500 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 ORC1Q13415 861 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 AMHR2Q16671 573 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 C2CD6Q53TS8 623 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 CHST13Q8NET6 341 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 SEPT5Q99719 369 aaPredicted RBP13.47□□□□□ -0.25
CHD4-211ENST00000544484 OSBPL8Q9BZF1 889 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 KLK14Q9P0G3 267 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 RGS9BPQ6ZS82 235 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 TADA2BQ86TJ2 420 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 AGBL3Q8NEM8 1001 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 PRMT1Q99873 361 aaKnown RBP13.47□□□□□ -0.25
CHD4-211ENST00000544484 KATNAL1Q9BW62 490 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 ZC3H4Q9UPT8 1303 aaKnown RBP13.47□□□□□ -0.25
CHD4-211ENST00000544484 MAFGO15525 162 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 RAD51CO43502 376 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 HBP1O60381 514 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 CELF2O95319 508 aaKnown RBP13.47□□□□□ -0.25
CHD4-211ENST00000544484 ICAM1P05362 532 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 DCAF6Q58WW2 860 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 EHD2Q9NZN4 543 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 AIPL1Q9NZN9 384 aa13.47□□□□□ -0.25
CHD4-211ENST00000544484 FARP1Q9Y4F1 1045 aaPredicted RBP13.47□□□□□ -0.25
CHD4-211ENST00000544484 TCP11X1B4DZS4 312 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 STAT4Q14765 748 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 TRPV6Q9H1D0 765 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 TSPYL2Q9H2G4 693 aaPredicted RBP13.46□□□□□ -0.25
CHD4-211ENST00000544484 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.46□□□□□ -0.254e-10■■□□□ 11.5
CHD4-211ENST00000544484 TBX20Q9UMR3 447 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 DDTLA6NHG4 134 aaPredicted RBP13.46□□□□□ -0.25
CHD4-211ENST00000544484 ITGB3P05106 788 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 TOB1P50616 345 aaPredicted RBP13.46□□□□□ -0.25
CHD4-211ENST00000544484 POLE2P56282 527 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 DEUP1Q05D60 604 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 PIGHQ14442 188 aaPredicted RBP13.46□□□□□ -0.25
CHD4-211ENST00000544484 POLR3CQ9BUI4 534 aaPredicted RBP13.46□□□□□ -0.25
CHD4-211ENST00000544484 XPO7Q9UIA9 1087 aaKnown RBP13.46□□□□□ -0.25
CHD4-211ENST00000544484 TRIM33Q9UPN9 1127 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 NEU2Q9Y3R4 380 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 C3orf70A6NLC5 250 aaPredicted RBP13.46□□□□□ -0.25
CHD4-211ENST00000544484 PGK2P07205 417 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 RAD51Q06609 339 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 PCSK7Q16549 785 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 THEMIS2Q5TEJ8 643 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 SLC7A14Q8TBB6 771 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 ANKEF1Q9NU02 776 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 PRMT7Q9NVM4 692 aaPredicted RBP13.46□□□□□ -0.25
CHD4-211ENST00000544484 ZC3H7BQ9UGR2 993 aaKnown RBP13.46□□□□□ -0.25
CHD4-211ENST00000544484 CHMP2BQ9UQN3 213 aa13.46□□□□□ -0.25
CHD4-211ENST00000544484 OR1G1P47890 313 aa13.46□□□□□ -0.26
CHD4-211ENST00000544484 MDH1BQ5I0G3 518 aa13.46□□□□□ -0.26
CHD4-211ENST00000544484 HPDLQ96IR7 371 aa13.46□□□□□ -0.26
CHD4-211ENST00000544484 MED15Q96RN5 788 aa13.46□□□□□ -0.26
CHD4-211ENST00000544484 ZFYVE28Q9HCC9 887 aa13.46□□□□□ -0.26
CHD4-211ENST00000544484 STILQ15468 1287 aa13.46□□□□□ -0.26
CHD4-211ENST00000544484 ZNF512Q96ME7 567 aaPredicted RBP13.46□□□□□ -0.26
CHD4-211ENST00000544484 TRIM62Q9BVG3 475 aa13.46□□□□□ -0.26
CHD4-211ENST00000544484 NIF3L1Q9GZT8 377 aa13.46□□□□□ -0.26
CHD4-211ENST00000544484 EIF4E1BA6NMX2 242 aaKnown RBP13.45□□□□□ -0.26
CHD4-211ENST00000544484 CST8O60676 142 aa13.45□□□□□ -0.26
CHD4-211ENST00000544484 HSPA9P38646 679 aaKnown RBP13.45□□□□□ -0.26
CHD4-211ENST00000544484 CDC42EP1Q00587 391 aa13.45□□□□□ -0.26
CHD4-211ENST00000544484 CDR2Q01850 454 aa13.45□□□□□ -0.26
CHD4-211ENST00000544484 BYSLQ13895 437 aaKnown RBP13.45□□□□□ -0.26
CHD4-211ENST00000544484 NOA1Q8NC60 698 aaKnown RBP13.45□□□□□ -0.26
CHD4-211ENST00000544484 SPATA18Q8TC71 538 aa13.45□□□□□ -0.26
CHD4-211ENST00000544484 CCDC124Q96CT7 223 aaKnown RBP13.45□□□□□ -0.26
CHD4-211ENST00000544484 KLF6Q99612 283 aaPredicted RBP13.45□□□□□ -0.26
CHD4-211ENST00000544484 RTFDC1Q9BY42 306 aaPredicted RBP13.45□□□□□ -0.26
CHD4-211ENST00000544484 ECT2Q9H8V3 914 aa13.45□□□□□ -0.26
CHD4-211ENST00000544484 METTL5Q9NRN9 209 aaKnown RBP13.45□□□□□ -0.26
CHD4-211ENST00000544484 EFTUD2Q15029 972 aaKnown RBP eCLIP13.45□□□□□ -0.268e-7■■■■■ 32.2
CHD4-211ENST00000544484 DGKDQ16760 1214 aa13.45□□□□□ -0.26
CHD4-211ENST00000544484 TRIML2Q8N7C3 387 aa13.45□□□□□ -0.26
CHD4-211ENST00000544484 ZNF507Q8TCN5 953 aa13.45□□□□□ -0.26
CHD4-211ENST00000544484 MKNK1Q9BUB5 465 aa13.45□□□□□ -0.26
CHD4-211ENST00000544484 NOP53Q9NZM5 478 aaKnown RBP13.45□□□□□ -0.26
CHD4-211ENST00000544484 EEF2KO00418 725 aaKnown RBP13.45□□□□□ -0.26
CHD4-211ENST00000544484 MEGF6O75095 1541 aa13.45□□□□□ -0.26
CHD4-211ENST00000544484 IRF1P10914 325 aa13.45□□□□□ -0.26
CHD4-211ENST00000544484 RPS12P25398 132 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms