RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PPEF2O14830 753 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CSPG5O95196 566 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CAVIN2O95810 425 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 C4BPAP04003 597 aaKnown RBP15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ITGB1P05556 798 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 RBP5P82980 135 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 PPP3CAQ08209 521 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TRPC3Q13507 836 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 C1orf220Q5T0J3 134 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TDRD10Q5VZ19 366 aaKnown RBP15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 C3orf58Q8NDZ4 430 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 GDPD5Q8WTR4 605 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 BCL7CQ8WUZ0 217 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 FAM161BQ96MY7 647 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TTYH1Q9H313 450 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TMEM8AQ9HCN3 771 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 PUF60Q9UHX1 559 aaKnown RBP15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 SF3B1O75533 1304 aaKnown RBP eCLIP15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 SCN1AP35498 2009 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 COL4A4P53420 1690 aaPredicted RBP15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ANO9A1A5B4 782 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 KCNJ18B7U540 433 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 PIRO00625 290 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TRAPPC3O43617 180 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 IGFBP6P24592 240 aaPredicted RBP15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 GTF2H1P32780 548 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 PLCB3Q01970 1234 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 KCNJ12Q14500 433 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 KRT39Q6A163 491 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 FUT10Q6P4F1 479 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 SV2AQ7L0J3 742 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 IRF2BP1Q8IU81 584 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TRIM59Q8IWR1 403 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 DHX40Q8IX18 779 aaKnown RBP15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 POF1BQ8WVV4 589 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 SLC35C1Q96A29 364 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ZNF560Q96MR9 790 aa15.61■□□□□ 0.09
TNFRSF1A-216ENST00000543995 EPOPA6NHQ4 379 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 RFXAPO00287 272 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CDK11BP21127 795 aaKnown RBP15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 PNPLA4P41247 253 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 PIK3CAP42336 1068 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 BRCC3P46736 316 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TAF6P49848 677 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 MXI1P50539 228 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ZNF445P59923 1031 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ELAVL2Q12926 359 aaKnown RBP15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 MYO1EQ12965 1108 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ZACNQ401N2 412 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 SV2CQ496J9 727 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 DDX53Q86TM3 631 aaKnown RBP15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ANKRD20A12PQ8NF67 263 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 SPPL3Q8TCT6 385 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CBX8Q9HC52 389 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 SIX4Q9UIU6 781 aa15.6■□□□□ 0.09
TNFRSF1A-216ENST00000543995 I3L4J1 428 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 GRM6O15303 877 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CST3P01034 146 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 PRKCSHP14314 528 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 EEF1GP26641 437 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CA8P35219 290 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 LILRA4P59901 499 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 MCCD1P59942 119 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TPM4P67936 248 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 UBE3AQ05086 875 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 KCNH2Q12809 1159 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 NCOA4Q13772 614 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 GRIN2CQ14957 1233 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 NCAPHQ15003 741 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TIGD5Q53EQ6 642 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TCP11X2Q5H9J9 407 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 FAM171A1Q5VUB5 890 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 SCARA3Q6AZY7 606 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 GPR153Q6NV75 609 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 DSTYKQ6XUX3 929 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 LUZP1Q86V48 1076 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CEP57Q86XR8 500 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 VPS52Q8N1B4 723 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 LRRC52Q8N7C0 313 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 FAM200AQ8TCP9 573 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 HPDLQ96IR7 371 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TUBGCP2Q9BSJ2 902 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 GPR62Q9BZJ7 368 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 PRDM12Q9H4Q4 367 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 STK39Q9UEW8 545 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 LZTS1Q9Y250 596 aa15.59■□□□□ 0.09
TNFRSF1A-216ENST00000543995 KPNA7A9QM74 516 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 GOLGA6L19H0YKK7 550 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 PES1O00541 588 aaKnown RBP15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 N4BP1O75113 896 aaKnown RBP15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 AFPP02771 609 aaKnown RBP15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 SOD2P04179 222 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TPM2P07951 284 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 FMO5P49326 533 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 FXR1P51114 621 aaKnown RBP eCLIP15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 MYL7Q01449 175 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 BMS1Q14692 1282 aaKnown RBP15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 IQCB1Q15051 598 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 MAN2A1Q16706 1144 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms