RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 PRMT7Q9NVM4 692 aaPredicted RBP15.15■□□□□ 0.02
LDB3-207ENST00000542786 NFU1Q9UMS0 254 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 PCDHA3Q9Y5H8 950 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 SLC15A5A6NIM6 579 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 PHACTR2O75167 634 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 CELF2O95319 508 aaKnown RBP15.14■□□□□ 0.01
LDB3-207ENST00000542786 MMP3P08254 477 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 RRM1P23921 792 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 IGBP1P78318 339 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 DMTNQ08495 405 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 MTHFD1LQ6UB35 978 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 CDR2LQ86X02 465 aaPredicted RBP15.14■□□□□ 0.01
LDB3-207ENST00000542786 PHF13Q86YI8 300 aaPredicted RBP15.14■□□□□ 0.01
LDB3-207ENST00000542786 MREGQ8N565 214 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 FAM71BQ8TC56 605 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 CPA5Q8WXQ8 436 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 TINF2Q9BSI4 451 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 TRIM7Q9C029 511 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 PDZD7Q9H5P4 517 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 A0A087WZ62 844 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 GNA15P30679 374 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 MAPK4P31152 587 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 ASPAP45381 313 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 CST9Q5W186 159 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 LLGL2Q6P1M3 1020 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 THNSL1Q8IYQ7 743 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 UBL4BQ8N7F7 174 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 C2orf69Q8N8R5 385 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 TRIM11Q96F44 468 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 FDXACB1Q9BRP7 624 aaPredicted RBP15.14■□□□□ 0.01
LDB3-207ENST00000542786 ACBD3Q9H3P7 528 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 SIX4Q9UIU6 781 aa15.14■□□□□ 0.01
LDB3-207ENST00000542786 H3BRB1 525 aa15.13■□□□□ 0.01
LDB3-207ENST00000542786 IL18RAPO95256 599 aa15.13■□□□□ 0.01
LDB3-207ENST00000542786 MCF2P10911 925 aa15.13■□□□□ 0.01
LDB3-207ENST00000542786 PYGMP11217 842 aa15.13■□□□□ 0.01
LDB3-207ENST00000542786 GPS2Q13227 327 aa15.13■□□□□ 0.01
LDB3-207ENST00000542786 ACVR2BQ13705 512 aa15.13■□□□□ 0.01
LDB3-207ENST00000542786 SIX1Q15475 284 aaPredicted RBP15.13■□□□□ 0.01
LDB3-207ENST00000542786 SGSM1Q2NKQ1 1148 aa15.13■□□□□ 0.01
LDB3-207ENST00000542786 MORN1Q5T089 497 aa15.13■□□□□ 0.01
LDB3-207ENST00000542786 DPP9Q86TI2 863 aa15.13■□□□□ 0.01
LDB3-207ENST00000542786 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.13■□□□□ 0.01
LDB3-207ENST00000542786 SH3GL2Q99962 352 aa15.13■□□□□ 0.01
LDB3-207ENST00000542786 ABHD16BQ9H3Z7 469 aa15.13■□□□□ 0.01
LDB3-207ENST00000542786 TUT1Q9H6E5 874 aaKnown RBP15.13■□□□□ 0.01
LDB3-207ENST00000542786 AMACRQ9UHK6 382 aa15.13■□□□□ 0.01
LDB3-207ENST00000542786 CCDC66A2RUB6 948 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 CXCL8P10145 99 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 TFAMQ00059 246 aaKnown RBP15.12■□□□□ 0.01
LDB3-207ENST00000542786 CUL1Q13616 776 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 CLUL1Q15846 466 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 GLIPR1L2Q4G1C9 344 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 IQSEC1Q6DN90 963 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 PLEKHA7Q6IQ23 1121 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 PRELID2Q8N945 189 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 ZBTB9Q96C00 473 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 VCPIP1Q96JH7 1222 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 NAP1L3Q99457 506 aaPredicted RBP15.12■□□□□ 0.01
LDB3-207ENST00000542786 IMPG2Q9BZV3 1241 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 FAN1Q9Y2M0 1017 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 TTI1O43156 1089 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 CSDE1O75534 798 aaKnown RBP15.12■□□□□ 0.01
LDB3-207ENST00000542786 VTNP04004 478 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 NFICP08651 508 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 GGCXP38435 758 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 NSFP46459 744 aaKnown RBP15.12■□□□□ 0.01
LDB3-207ENST00000542786 C1QBPQ07021 282 aaKnown RBP15.12■□□□□ 0.01
LDB3-207ENST00000542786 GRIK4Q16099 956 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 CYP1B1Q16678 543 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 PASD1Q8IV76 773 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 KIAA0319LQ8IZA0 1049 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 TMEM130Q8N3G9 435 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 WHAMMQ8TF30 809 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 ZNF606Q8WXB4 792 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 IFT81Q8WYA0 676 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 PIK3R5Q8WYR1 880 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 FAM212AQ96EL1 285 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 BCO2Q9BYV7 579 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 CELF4Q9BZC1 486 aaKnown RBP15.12■□□□□ 0.01
LDB3-207ENST00000542786 NEUROG2Q9H2A3 272 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 RRAGCQ9HB90 399 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 CISHQ9NSE2 258 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.12■□□□□ 0.01
LDB3-207ENST00000542786 ANAPC7Q9UJX3 599 aa15.12■□□□□ 0.01
LDB3-207ENST00000542786 A0A0U1RQG5 324 aaPredicted RBP15.11■□□□□ 0.01
LDB3-207ENST00000542786 TCRBV5S1A1TA0A578 114 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 TCRBV7S2A1N4TA0A589 114 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 STAG3L1P0CL83 205 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 HSPA6P17066 643 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 ARF4P18085 180 aaPredicted RBP15.11■□□□□ 0.01
LDB3-207ENST00000542786 CDH5P33151 784 aaPredicted RBP15.11■□□□□ 0.01
LDB3-207ENST00000542786 HSPA9P38646 679 aaKnown RBP15.11■□□□□ 0.01
LDB3-207ENST00000542786 PTGIRP43119 386 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 GYS2P54840 703 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 OSTNP61366 133 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 PPFIA1Q13136 1202 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 MAMLD1Q13495 774 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 IRF5Q13568 498 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 PPP2R5EQ16537 467 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms