RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 MAGOHBQ96A72 148 aaKnown RBP10.52□□□□□ -0.72
SS18-205ENST00000542420 ARL8AQ96BM9 186 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 ACO2Q99798 780 aaKnown RBP10.52□□□□□ -0.72
SS18-205ENST00000542420 TARS2Q9BW92 718 aaKnown RBP10.52□□□□□ -0.72
SS18-205ENST00000542420 FOXP3Q9BZS1 431 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 HAPLN2Q9GZV7 340 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 PCDHGC3Q9UN70 934 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 MCM3APO60318 1980 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 MYO1FO00160 1098 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 B4GALT4O60513 344 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 NR1D1P20393 614 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 GNA15P30679 374 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 PTPN7P35236 360 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 CETN2P41208 172 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 MRPS25P82663 173 aaKnown RBP10.52□□□□□ -0.73
SS18-205ENST00000542420 R3HDM1Q15032 1099 aaKnown RBP10.52□□□□□ -0.73
SS18-205ENST00000542420 MAPK6Q16659 721 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 SGSM1Q2NKQ1 1148 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 TTC31Q49AM3 519 aaPredicted RBP10.52□□□□□ -0.73
SS18-205ENST00000542420 ZNF484Q5JVG2 852 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 PRAMEF18Q5VWM3 479 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 CCDC62Q6P9F0 684 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 CCDC137Q6PK04 289 aaKnown RBP10.52□□□□□ -0.73
SS18-205ENST00000542420 KATNAL2Q8IYT4 538 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 ZNF526Q8TF50 670 aaPredicted RBP10.52□□□□□ -0.73
SS18-205ENST00000542420 FZD8Q9H461 694 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 CNOT10Q9H9A5 744 aaKnown RBP10.52□□□□□ -0.73
SS18-205ENST00000542420 ERVK-5Q9HDB9 667 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 ANAPC7Q9UJX3 599 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 CPSF3Q9UKF6 684 aaKnown RBP10.52□□□□□ -0.73
SS18-205ENST00000542420 PNMA3Q9UL41 463 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 MROH7Q68CQ1 1323 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 MGAMO43451 1857 aa10.52□□□□□ -0.73
SS18-205ENST00000542420 ACKR2O00590 384 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 SOCS7O14512 581 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 ABLIM1O14639 778 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 PAEPP09466 180 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 PYGMP11217 842 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 COPS2P61201 443 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 ZNF844Q08AG5 666 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 NCOA4Q13772 614 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 KCTD2Q14681 263 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 DUOXA2Q1HG44 320 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 MPZL3Q6UWV2 235 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 RHOT1Q8IXI2 618 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 RBBP8NLQ8NC74 664 aaPredicted RBP10.51□□□□□ -0.73
SS18-205ENST00000542420 CCHCR1Q8TD31 782 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 ART4Q93070 314 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 FGD4Q96M96 766 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 STMN4Q9H169 189 aaPredicted RBP10.51□□□□□ -0.73
SS18-205ENST00000542420 NEUROG2Q9H2A3 272 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 PABPC3Q9H361 631 aaKnown RBP10.51□□□□□ -0.73
SS18-205ENST00000542420 PARVAQ9NVD7 372 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 IP6K2Q9UHH9 426 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 PCDHB4Q9Y5E5 795 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 GRIN2DO15399 1336 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 RBM47A0AV96 593 aaKnown RBP10.51□□□□□ -0.73
SS18-205ENST00000542420 MAGEB2O15479 319 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 ECEL1O95672 775 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 PRKCBP05771 671 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 SP4Q02446 784 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 TNFAIP2Q03169 654 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 LMNB2Q03252 620 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 IRF5Q13568 498 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 PTK6Q13882 451 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 TTLL4Q14679 1199 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 CEP85LQ5SZL2 805 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 ZDHHC24Q6UX98 284 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 TRMT10CQ7L0Y3 403 aaKnown RBP10.51□□□□□ -0.73
SS18-205ENST00000542420 ARMC9Q7Z3E5 817 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 ZNF467Q7Z7K2 595 aaPredicted RBP10.51□□□□□ -0.73
SS18-205ENST00000542420 TTC39CQ8N584 583 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 NLGN2Q8NFZ4 835 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 EXD1Q8NHP7 514 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 PRPF31Q8WWY3 499 aaKnown RBP10.51□□□□□ -0.73
SS18-205ENST00000542420 EMID1Q96A84 441 aaPredicted RBP10.51□□□□□ -0.73
SS18-205ENST00000542420 CENPTQ96BT3 561 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 PGM2Q96G03 612 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 MMP19Q99542 508 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 NIF3L1Q9GZT8 377 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 CXorf56Q9H5V9 222 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 APOBEC3GQ9HC16 384 aaKnown RBP10.51□□□□□ -0.73
SS18-205ENST00000542420 PTPRHQ9HD43 1115 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 GRHL1Q9NZI5 618 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 TNFSF13BQ9Y275 285 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 TELO2Q9Y4R8 837 aa10.51□□□□□ -0.73
SS18-205ENST00000542420 CAPN15O75808 1086 aa10.5□□□□□ -0.73
SS18-205ENST00000542420 CPP00450 1065 aa10.5□□□□□ -0.73
SS18-205ENST00000542420 RARGP13631 454 aa10.5□□□□□ -0.73
SS18-205ENST00000542420 ITIH2P19823 946 aa10.5□□□□□ -0.73
SS18-205ENST00000542420 EIF4BP23588 611 aaKnown RBP10.5□□□□□ -0.73
SS18-205ENST00000542420 ACOT2P49753 483 aa10.5□□□□□ -0.73
SS18-205ENST00000542420 DHX9Q08211 1270 aaKnown RBP10.5□□□□□ -0.73
SS18-205ENST00000542420 LAMTOR4Q0VGL1 99 aa10.5□□□□□ -0.73
SS18-205ENST00000542420 ZNF211Q13398 564 aaPredicted RBP10.5□□□□□ -0.73
SS18-205ENST00000542420 MOGSQ13724 837 aa10.5□□□□□ -0.73
SS18-205ENST00000542420 PLCB4Q15147 1175 aa10.5□□□□□ -0.73
SS18-205ENST00000542420 TRADDQ15628 312 aa10.5□□□□□ -0.73
SS18-205ENST00000542420 DRICH1Q6PGQ1 229 aaPredicted RBP10.5□□□□□ -0.73
SS18-205ENST00000542420 NT5DC4Q86YG4 428 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 681.8 ms