RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 HVCN1Q96D96 273 aa17.02■□□□□ 0.32
VPS33A-206ENST00000542310 KIF12Q96FN5 646 aa17.02■□□□□ 0.32
VPS33A-206ENST00000542310 DNMT3BQ9UBC3 853 aaKnown RBP17.02■□□□□ 0.32
VPS33A-206ENST00000542310 FBXL5Q9UKA1 691 aa17.02■□□□□ 0.32
VPS33A-206ENST00000542310 MYO15AQ9UKN7 3530 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 A0A0B4J269 797 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 KRBA1A5PL33 1030 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 PROB1E7EW31 1015 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 M0QZQ0 153 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 LRG1P02750 347 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 PAX3P23760 479 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 ELF1P32519 619 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 DDIT3P35638 169 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 TXLNAP40222 546 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 TNFSF9P41273 254 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 DHX8Q14562 1220 aaKnown RBP17.01■□□□□ 0.31
VPS33A-206ENST00000542310 ENOX2Q16206 610 aaKnown RBP17.01■□□□□ 0.31
VPS33A-206ENST00000542310 CTXN3Q4LDR2 81 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 PHLDB3Q6NSJ2 640 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 NPAS3Q8IXF0 933 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 KRI1Q8N9T8 703 aaKnown RBP17.01■□□□□ 0.31
VPS33A-206ENST00000542310 ATOH1Q92858 354 aaPredicted RBP17.01■□□□□ 0.31
VPS33A-206ENST00000542310 PHOX2BQ99453 314 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 RPF1Q9H9Y2 349 aaKnown RBP17.01■□□□□ 0.31
VPS33A-206ENST00000542310 ARHGEF3Q9NR81 526 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 SEL1LQ9UBV2 794 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 CCDC39Q9UFE4 941 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 FBXO2Q9UK22 296 aaPredicted RBP17.01■□□□□ 0.31
VPS33A-206ENST00000542310 SRPRBQ9Y5M8 271 aaKnown RBP17.01■□□□□ 0.31
VPS33A-206ENST00000542310 CLIC4Q9Y696 253 aa17.01■□□□□ 0.31
VPS33A-206ENST00000542310 TCHHQ07283 1943 aa17■□□□□ 0.31
VPS33A-206ENST00000542310 PRRG1O14668 218 aa17■□□□□ 0.31
VPS33A-206ENST00000542310 RHOP08100 348 aa17■□□□□ 0.31
VPS33A-206ENST00000542310 SYT1P21579 422 aa17■□□□□ 0.31
VPS33A-206ENST00000542310 POU5F1Q01860 360 aaKnown RBP17■□□□□ 0.31
VPS33A-206ENST00000542310 ITFG1Q8TB96 612 aa17■□□□□ 0.31
VPS33A-206ENST00000542310 GPR152Q8TDT2 470 aa17■□□□□ 0.31
VPS33A-206ENST00000542310 FGF14Q92915 247 aa17■□□□□ 0.31
VPS33A-206ENST00000542310 MSTO1Q9BUK6 570 aa17■□□□□ 0.31
VPS33A-206ENST00000542310 HCFC1R1Q9NWW0 138 aa17■□□□□ 0.31
VPS33A-206ENST00000542310 GDE1Q9NZC3 331 aa17■□□□□ 0.31
VPS33A-206ENST00000542310 AFF4Q9UHB7 1163 aaKnown RBP17■□□□□ 0.31
VPS33A-206ENST00000542310 DERAQ9Y315 318 aa17■□□□□ 0.31
VPS33A-206ENST00000542310 INSL5Q9Y5Q6 135 aa17■□□□□ 0.31
VPS33A-206ENST00000542310 LACTBL1A8MY62 500 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 H0Y858 1186 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 MICAL2O94851 1124 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 OAZ2O95190 189 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 RFX1P22670 979 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 NBL1P41271 181 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 YWHAHQ04917 246 aaPredicted RBP16.99■□□□□ 0.31
VPS33A-206ENST00000542310 SPATA1Q5VX52 437 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 SLFN12LQ6IEE8 588 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 SLC39A4Q6P5W5 647 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 PARM1Q6UWI2 310 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 BEST2Q8NFU1 509 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 EPSTI1Q96J88 318 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 BACH2Q9BYV9 841 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 ZHX3Q9H4I2 956 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
VPS33A-206ENST00000542310 TBC1D17Q9HA65 648 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 CYP4F11Q9HBI6 524 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 FAM86C1Q9NVL1 165 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 CPSF3Q9UKF6 684 aaKnown RBP16.99■□□□□ 0.31
VPS33A-206ENST00000542310 CA14Q9ULX7 337 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 MRPS23Q9Y3D9 190 aaKnown RBP16.99■□□□□ 0.31
VPS33A-206ENST00000542310 STYXL1Q9Y6J8 313 aa16.99■□□□□ 0.31
VPS33A-206ENST00000542310 SCN1AP35498 2009 aa16.98■□□□□ 0.31
VPS33A-206ENST00000542310 PPP1R37O75864 691 aa16.98■□□□□ 0.31
VPS33A-206ENST00000542310 PTPN2P17706 415 aa16.98■□□□□ 0.31
VPS33A-206ENST00000542310 TYMPP19971 482 aa16.98■□□□□ 0.31
VPS33A-206ENST00000542310 MARCKSP29966 332 aaPredicted RBP16.98■□□□□ 0.31
VPS33A-206ENST00000542310 NMT1P30419 496 aaKnown RBP16.98■□□□□ 0.31
VPS33A-206ENST00000542310 PFKPQ01813 784 aa16.98■□□□□ 0.31
VPS33A-206ENST00000542310 PRSS36Q5K4E3 855 aa16.98■□□□□ 0.31
VPS33A-206ENST00000542310 ZBTB41Q5SVQ8 909 aa16.98■□□□□ 0.31
VPS33A-206ENST00000542310 ELMOD1Q8N336 334 aa16.98■□□□□ 0.31
VPS33A-206ENST00000542310 LEMD2Q8NC56 503 aa16.98■□□□□ 0.31
VPS33A-206ENST00000542310 ASB7Q9H672 318 aa16.98■□□□□ 0.31
VPS33A-206ENST00000542310 C2CD2Q9Y426 696 aa16.98■□□□□ 0.31
VPS33A-206ENST00000542310 PATJQ8NI35 1801 aa16.98■□□□□ 0.31
VPS33A-206ENST00000542310 COL4A2P08572 1712 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 OR6C75A6NL08 312 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 K7ELQ4 463 aaPredicted RBP16.97■□□□□ 0.31
VPS33A-206ENST00000542310 ZNF197O14709 1029 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 PI15O43692 258 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 ECI2O75521 394 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 CPB1P15086 417 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 GAP43P17677 238 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 ARPP19P56211 112 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 SPAG1Q07617 926 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 TMEM132DQ14C87 1099 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 SLC5A9Q2M3M2 681 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 RRAGBQ5VZM2 374 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 CCDC73Q6ZRK6 1079 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 USP49Q70CQ1 688 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 SFR1Q86XK3 245 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 DTWD2Q8NBA8 298 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 SHDQ96IW2 340 aa16.97■□□□□ 0.31
VPS33A-206ENST00000542310 MTMR6Q9Y217 621 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms