RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 FAM205CA6NFA0 338 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 INO80B-WBP1J3KQ70 363 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 CHMP2AO43633 222 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 B3GAT3O94766 335 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 AKAP5P24588 427 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 RFC5P40937 340 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 CCR2P41597 374 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 MCM2P49736 904 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 CYP4A11Q02928 519 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 LAMTOR4Q0VGL1 99 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 LRCH2Q5VUJ6 765 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 PKN3Q6P5Z2 889 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 GPR155Q7Z3F1 870 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 ARID3BQ8IVW6 561 aaPredicted RBP10.48□□□□□ -0.73
YBX3-211ENST00000541351 MINDY1Q8N5J2 469 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
YBX3-211ENST00000541351 GSTCDQ8NEC7 633 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 CCDC12Q8WUD4 166 aaPredicted RBP10.48□□□□□ -0.73
YBX3-211ENST00000541351 RABGGTAQ92696 567 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 CNOT6LQ96LI5 555 aaKnown RBP10.48□□□□□ -0.73
YBX3-211ENST00000541351 UROC1Q96N76 676 aa10.48□□□□□ -0.73
YBX3-211ENST00000541351 FCRL3Q96P31 734 aaPredicted RBP10.48□□□□□ -0.73
YBX3-211ENST00000541351 NXF3Q9H4D5 531 aaKnown RBP10.48□□□□□ -0.73
YBX3-211ENST00000541351 ERVH48-1M5A8F1 160 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 TSPAN1O60635 241 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 WISP1O95388 367 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 SERPINF2P08697 491 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 WEE1P30291 646 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 POU5F1BQ06416 359 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 SRSF1Q07955 248 aaKnown RBP eCLIP10.47□□□□□ -0.73
YBX3-211ENST00000541351 CYP4F3Q08477 520 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 TAF1BQ53T94 588 aaPredicted RBP10.47□□□□□ -0.73
YBX3-211ENST00000541351 WWC2Q6AWC2 1192 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 FSTL4Q6MZW2 842 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 POTEHQ6S545 545 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 SYNE3Q6ZMZ3 975 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 TMPRSS7Q7RTY8 843 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 CCDC82Q8N4S0 544 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 RPLP0P6Q8NHW5 317 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 IGDCC4Q8TDY8 1250 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 BAP1Q92560 729 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 WBP1Q96G27 269 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 PRORYQ9H606 182 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 MINDY3Q9H8M7 445 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 SENP2Q9HC62 589 aa10.47□□□□□ -0.73
YBX3-211ENST00000541351 DNAAF2Q9NVR5 837 aaKnown RBP10.47□□□□□ -0.73
YBX3-211ENST00000541351 ARHGAP33O14559 1287 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 SYN3O14994 580 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 AP5Z1O43299 807 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 HOXC13P31276 330 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 CIITAP33076 1130 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 CLK2P49760 499 aaKnown RBP10.46□□□□□ -0.73
YBX3-211ENST00000541351 EPHB3P54753 998 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 ARPP19P56211 112 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 PTENP60484 403 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 PSMC5P62195 406 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 FAM193AP78312 1265 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 TWF1Q12792 350 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 PSMD2Q13200 908 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 RUNX3Q13761 415 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 UGCGQ16739 394 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 ANKRD45Q5TZF3 282 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 CC2D1AQ6P1N0 951 aaPredicted RBP10.46□□□□□ -0.73
YBX3-211ENST00000541351 TMTC3Q6ZXV5 915 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 GLRX5Q86SX6 157 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 FERMT3Q86UX7 667 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 NAXDQ8IW45 347 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 DDX27Q96GQ7 796 aaKnown RBP10.46□□□□□ -0.73
YBX3-211ENST00000541351 CPB2Q96IY4 423 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 ZFYVE19Q96K21 471 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 TBC1D32Q96NH3 1257 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 GCNAQ96QF7 691 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 CEP89Q96ST8 783 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 P2RY13Q9BPV8 354 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 PAAF1Q9BRP4 392 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 C6orf50Q9HD87 102 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 RBM28Q9NW13 759 aaKnown RBP10.46□□□□□ -0.73
YBX3-211ENST00000541351 SNTG2Q9NY99 539 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 KLK14Q9P0G3 267 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 AFF4Q9UHB7 1163 aaKnown RBP10.46□□□□□ -0.73
YBX3-211ENST00000541351 MBD1Q9UIS9 605 aaPredicted RBP10.46□□□□□ -0.73
YBX3-211ENST00000541351 CIZ1Q9ULV3 898 aaPredicted RBP10.46□□□□□ -0.73
YBX3-211ENST00000541351 SLC12A7Q9Y666 1083 aa10.46□□□□□ -0.73
YBX3-211ENST00000541351 THADAQ6YHU6 1953 aa10.46□□□□□ -0.74
YBX3-211ENST00000541351 hCG_1642624A0A1W2PR95 340 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 A0A1W2PRU2 124 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 TRABD2BA6NFA1 517 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 MARCH6O60337 910 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 MOSPD3O75425 235 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 NPTXRO95502 500 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 EGFP01133 1207 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 PRKCBP05771 671 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 HLA-EP13747 358 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 CD59P13987 128 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 PEAR1Q5VY43 1037 aaPredicted RBP10.45□□□□□ -0.74
YBX3-211ENST00000541351 JAKMIP3Q5VZ66 844 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 ANO7Q6IWH7 933 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 OTUD6AQ7L8S5 288 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 RASSF3Q86WH2 238 aa10.45□□□□□ -0.74
YBX3-211ENST00000541351 HS6ST3Q8IZP7 471 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms