RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 STRN3Q13033 797 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 PRELID2Q8N945 189 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 TMC2Q8TDI7 906 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 CENPTQ96BT3 561 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 HAUS2Q9NVX0 235 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 KCNG1Q9UIX4 513 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 ALG6Q9Y672 507 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 K7ERI5 159 aa18.33■□□□□ 0.53
SPIDR-227ENST00000541342 PIGRP01833 764 aa18.33■□□□□ 0.53
SPIDR-227ENST00000541342 MMP13P45452 471 aa18.33■□□□□ 0.53
SPIDR-227ENST00000541342 GCLCP48506 637 aaPredicted RBP18.33■□□□□ 0.53
SPIDR-227ENST00000541342 WNT7BP56706 349 aa18.33■□□□□ 0.53
SPIDR-227ENST00000541342 ARHGAP1Q07960 439 aa18.33■□□□□ 0.53
SPIDR-227ENST00000541342 CCDC91Q7Z6B0 441 aa18.33■□□□□ 0.53
SPIDR-227ENST00000541342 KAT5Q92993 513 aa18.33■□□□□ 0.53
SPIDR-227ENST00000541342 CHMP6Q96FZ7 201 aa18.33■□□□□ 0.53
SPIDR-227ENST00000541342 CCDC114Q96M63 670 aa18.33■□□□□ 0.53
SPIDR-227ENST00000541342 CNOT10Q9H9A5 744 aaKnown RBP18.33■□□□□ 0.53
SPIDR-227ENST00000541342 GOLGA6L7A0A1B0GV03 622 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 CHN1P15882 459 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 IFI35P80217 286 aaPredicted RBP18.33■□□□□ 0.52
SPIDR-227ENST00000541342 GKAP1Q5VSY0 366 aaPredicted RBP18.33■□□□□ 0.52
SPIDR-227ENST00000541342 TRAPPC12Q8WVT3 735 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 PGM2Q96G03 612 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 KATNBL1Q9H079 304 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 CHORDC1Q9UHD1 332 aaPredicted RBP18.33■□□□□ 0.52
SPIDR-227ENST00000541342 TTLL13PA6NNM8 815 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 RFX1P22670 979 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 RPL21P46778 160 aaKnown RBP18.33■□□□□ 0.52
SPIDR-227ENST00000541342 NLRP11P59045 1033 aaKnown RBP18.33■□□□□ 0.52
SPIDR-227ENST00000541342 DHX34Q14147 1143 aaKnown RBP18.33■□□□□ 0.52
SPIDR-227ENST00000541342 KRT39Q6A163 491 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 CYB5D1Q6P9G0 228 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 LRRC71Q8N4P6 559 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 ZBTB10Q96DT7 871 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 TARS2Q9BW92 718 aaKnown RBP18.33■□□□□ 0.52
SPIDR-227ENST00000541342 TMEM8AQ9HCN3 771 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 COQ4Q9Y3A0 265 aa18.33■□□□□ 0.52
SPIDR-227ENST00000541342 IGKV6-21A0A0C4DH24 114 aa18.32■□□□□ 0.52
SPIDR-227ENST00000541342 FAM187AA6NFU0 413 aa18.32■□□□□ 0.52
SPIDR-227ENST00000541342 EXTL3O43909 919 aa18.32■□□□□ 0.52
SPIDR-227ENST00000541342 ADCY3O60266 1144 aa18.32■□□□□ 0.52
SPIDR-227ENST00000541342 DLATP10515 647 aaKnown RBP18.32■□□□□ 0.52
SPIDR-227ENST00000541342 DRG2P55039 364 aaKnown RBP18.32■□□□□ 0.52
SPIDR-227ENST00000541342 HADHBP55084 474 aaKnown RBP18.32■□□□□ 0.52
SPIDR-227ENST00000541342 SLC29A2Q14542 456 aa18.32■□□□□ 0.52
SPIDR-227ENST00000541342 GPR142Q7Z601 462 aa18.32■□□□□ 0.52
SPIDR-227ENST00000541342 ABRAQ8N0Z2 381 aa18.32■□□□□ 0.52
SPIDR-227ENST00000541342 ELMO3Q96BJ8 720 aa18.32■□□□□ 0.52
SPIDR-227ENST00000541342 SEMA4AQ9H3S1 761 aa18.32■□□□□ 0.52
SPIDR-227ENST00000541342 SEPT11Q9NVA2 429 aaKnown RBP18.32■□□□□ 0.52
SPIDR-227ENST00000541342 CRELD2Q6UXH1 353 aaPredicted RBP18.32■□□□□ 0.52
SPIDR-227ENST00000541342 CPLX4Q7Z7G2 160 aa18.32■□□□□ 0.52
SPIDR-227ENST00000541342 PSPC1Q8WXF1 523 aaKnown RBP18.32■□□□□ 0.52
SPIDR-227ENST00000541342 TMEM134Q9H6X4 195 aa18.32■□□□□ 0.52
SPIDR-227ENST00000541342 TNFAIP3P21580 790 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 ZBTB41Q5SVQ8 909 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 TAS1R2Q8TE23 839 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 NAP1L3Q99457 506 aaPredicted RBP18.31■□□□□ 0.52
SPIDR-227ENST00000541342 AGPAT1Q99943 283 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 PPME1Q9Y570 386 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 GOLGA6L10A0A0M3HER8 536 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 TCRBV7S2A1N4TA0A589 114 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 CHUKO15111 745 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 STRNO43815 780 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 PHF2O75151 1096 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 SNAI1O95863 264 aaPredicted RBP18.31■□□□□ 0.52
SPIDR-227ENST00000541342 CTNNA2P26232 953 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 ACOT2P49753 483 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 SV2AQ7L0J3 742 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 HOOK3Q86VS8 718 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 CPNE8Q86YQ8 564 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 ZNF516Q92618 1163 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 KREMEN1Q96MU8 473 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 MYCBPQ99417 103 aaPredicted RBP18.31■□□□□ 0.52
SPIDR-227ENST00000541342 RNPEPQ9H4A4 650 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 SMARCAD1Q9H4L7 1026 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 AGO2Q9UKV8 859 aaKnown RBP18.31■□□□□ 0.52
SPIDR-227ENST00000541342 EVPLQ92817 2033 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 MMEP08473 750 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 SCP2P22307 547 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 PEX5P50542 639 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 LAMTOR4Q0VGL1 99 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.31■□□□□ 0.52
SPIDR-227ENST00000541342 IVNS1ABPQ9Y6Y0 642 aa18.31■□□□□ 0.52
SPIDR-227ENST00000541342 XRCC4Q13426 336 aa18.3■□□□□ 0.52
SPIDR-227ENST00000541342 GRB14Q14449 540 aa18.3■□□□□ 0.52
SPIDR-227ENST00000541342 PPP2R5EQ16537 467 aa18.3■□□□□ 0.52
SPIDR-227ENST00000541342 IER5Q5VY09 327 aa18.3■□□□□ 0.52
SPIDR-227ENST00000541342 C11orf63Q6NUN7 778 aa18.3■□□□□ 0.52
SPIDR-227ENST00000541342 PARK7Q99497 189 aaKnown RBP18.3■□□□□ 0.52
SPIDR-227ENST00000541342 CCDC113Q9H0I3 377 aa18.3■□□□□ 0.52
SPIDR-227ENST00000541342 VTA1Q9NP79 307 aa18.3■□□□□ 0.52
SPIDR-227ENST00000541342 NMRK2Q9NPI5 230 aa18.3■□□□□ 0.52
SPIDR-227ENST00000541342 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.3■□□□□ 0.524e-7■■■■■ 38.1
SPIDR-227ENST00000541342 PCYOX1Q9UHG3 505 aa18.3■□□□□ 0.52
SPIDR-227ENST00000541342 CENPFP49454 3210 aa18.3■□□□□ 0.52
SPIDR-227ENST00000541342 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.3■□□□□ 0.52
SPIDR-227ENST00000541342 RBM47A0AV96 593 aaKnown RBP18.3■□□□□ 0.52
SPIDR-227ENST00000541342 ATP2C2O75185 946 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms