RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 WDR81Q562E7 1941 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 DNAH12Q6ZR08 3092 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 ARID2Q68CP9 1835 aa7.2□□□□□ -1.26
CLTCL1-206ENST00000540896 A0A1W2PQC6 194 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 N4BP1O75113 896 aaKnown RBP7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 PHACTR2O75167 634 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 CLTAP09496 248 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 CLTBP09497 229 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 STAG3L1P0CL83 205 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 GHRP10912 638 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 CKBP12277 381 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 SELPP16109 830 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 TRIM21P19474 475 aaKnown RBP7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 IBSPP21815 317 aaPredicted RBP7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 PROZP22891 400 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 HOXA11P31270 313 aaPredicted RBP7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 GCLMP48507 274 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 FMO5P49326 533 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 YARSP54577 528 aaKnown RBP7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 DCAF4L1Q3SXM0 396 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 MIIPQ5JXC2 388 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 ZBTB41Q5SVQ8 909 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 TWF2Q6IBS0 349 aaKnown RBP7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 GBP6Q6ZN66 633 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 CCDC186Q7Z3E2 898 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 PRICKLE2Q7Z3G6 844 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 CYP2U1Q7Z449 544 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 HACE1Q8IYU2 909 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 C7orf61Q8IZ16 206 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 USP38Q8NB14 1042 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 NEK11Q8NG66 645 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 CAGE1Q8TC20 777 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 DHX38Q92620 1227 aaKnown RBP7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 SLC35C1Q96A29 364 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 BORCS6Q96GS4 357 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 FBXL18Q96ME1 805 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 ACAP3Q96P50 834 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 PPP1R9BQ96SB3 815 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 POP1Q99575 1024 aaKnown RBP7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 CRACR2AQ9BSW2 395 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 NUP58Q9BVL2 599 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 CCDC94Q9BW85 323 aaPredicted RBP7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 APOL6Q9BWW8 343 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 HAPLN2Q9GZV7 340 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 PDE11AQ9HCR9 933 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 PTPRHQ9HD43 1115 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 PRDM5Q9NQX1 630 aaPredicted RBP7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 AGPAT5Q9NUQ2 364 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 TMEM39AQ9NV64 488 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 INTS13Q9NVM9 706 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 IMPACTQ9P2X3 320 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 PRKAG2Q9UGJ0 569 aa7.19□□□□□ -1.26
CLTCL1-206ENST00000540896 KAT6AQ92794 2004 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 TRIM43BA6NCK2 446 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 LRRIQ3A6PVS8 624 aaPredicted RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 MEN1O00255 615 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 ABLIM1O14639 778 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 ARHGEF15O94989 841 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 IL18RAPO95256 599 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 FBXO45P0C2W1 286 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 CD52P31358 61 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 GTF2H1P32780 548 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 TNFSF9P41273 254 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 GSK3AP49840 483 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 GSDMDP57764 484 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 DLG4P78352 724 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 TFAMQ00059 246 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 MYL7Q01449 175 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 MLLT1Q03111 559 aaPredicted RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 MGAT3Q09327 533 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 NR1H3Q13133 447 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 BIRC3Q13489 604 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 LPIN1Q14693 890 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 PSMD6Q15008 389 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 EXOC3L4Q17RC7 722 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 TRIM71Q2Q1W2 868 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 WDR44Q5JSH3 913 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 FAM26DQ5JW98 314 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 FBXO47Q5MNV8 452 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 KRT39Q6A163 491 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 CRELD2Q6UXH1 353 aaPredicted RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 LRRC8DQ7L1W4 858 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 CACNA2D4Q7Z3S7 1137 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 FAM228AQ86W67 206 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 CEP120Q8N960 986 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 ZNF397Q8NF99 534 aaPredicted RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 PARD3BQ8TEW8 1205 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 CACTINQ8WUQ7 758 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 TRIM43Q96BQ3 446 aaPredicted RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 CCDC51Q96ER9 411 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 PDLIM2Q96JY6 352 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 ERGIC2Q96RQ1 377 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 LSM14BQ9BX40 385 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 EIF2AQ9BY44 585 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 CHST12Q9NRB3 414 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 FAM207AQ9NSI2 230 aaPredicted RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 PARP2Q9UGN5 583 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 CPSF3Q9UKF6 684 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 PADI3Q9ULW8 664 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 LUC7L2Q9Y383 392 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms