RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ENTPD7Q9NQZ7 604 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 ITGA11Q9UKX5 1188 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 AGAP1Q9UPQ3 857 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 MTCH2Q9Y6C9 303 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 CITO14578 2027 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 PTPRJQ12913 1337 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 TDRD15B5MCY1 1934 aaKnown RBP16.73■□□□□ 0.27
DDB1-218ENST00000540784 LRRIQ3A6PVS8 624 aaPredicted RBP16.73■□□□□ 0.27
DDB1-218ENST00000540784 PHACTR2O75167 634 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 CSPG5O95196 566 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 GNA14O95837 355 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 EFEMP2O95967 443 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 SOD2P04179 222 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 ITGB3P05106 788 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 CTSAP10619 480 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 FOSL2P15408 326 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 BFSP1Q12934 665 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 FRMD5Q7Z6J6 570 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 CEP57Q86XR8 500 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 C1orf127Q8N9H9 656 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 C3orf58Q8NDZ4 430 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 FAM84AQ96KN4 292 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 MED15Q96RN5 788 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 VN1R3Q9BXE9 311 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 GZF1Q9H116 711 aaPredicted RBP16.73■□□□□ 0.27
DDB1-218ENST00000540784 ARMCX3Q9UH62 379 aaPredicted RBP16.73■□□□□ 0.27
DDB1-218ENST00000540784 SSX2IPQ9Y2D8 614 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 RALGAPA2Q2PPJ7 1873 aa16.73■□□□□ 0.27
DDB1-218ENST00000540784 I3L4J1 428 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 FSCN2O14926 492 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 STX10O60499 249 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 POLR2BP30876 1174 aaKnown RBP16.72■□□□□ 0.27
DDB1-218ENST00000540784 CA8P35219 290 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 IRS1P35568 1242 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 PNPLA4P41247 253 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 BRCC3P46736 316 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 LILRA4P59901 499 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 MCCD1P59942 119 aaPredicted RBP16.72■□□□□ 0.27
DDB1-218ENST00000540784 TYRO3Q06418 890 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 TRPC3Q13507 836 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 SMC1AQ14683 1233 aaKnown RBP16.72■□□□□ 0.27
DDB1-218ENST00000540784 CCDC40Q4G0X9 1142 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 TIGD5Q53EQ6 642 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 DSTYKQ6XUX3 929 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 CREBRFQ8IUR6 639 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 MRPL43Q8N983 215 aaKnown RBP16.72■□□□□ 0.27
DDB1-218ENST00000540784 HERC2P3Q9BVR0 1158 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 MRPL17Q9NRX2 175 aaKnown RBP16.72■□□□□ 0.27
DDB1-218ENST00000540784 CHST7Q9NS84 486 aa16.72■□□□□ 0.27
DDB1-218ENST00000540784 TRIP11Q15643 1979 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 PPEF2O14830 753 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 CST3P01034 146 aaPredicted RBP16.71■□□□□ 0.27
DDB1-218ENST00000540784 C4BPAP04003 597 aaKnown RBP16.71■□□□□ 0.27
DDB1-218ENST00000540784 CCDC192P0DO97 292 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 GTF2H1P32780 548 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 GLUD2P49448 558 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 TAF6P49848 677 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 MYO1EQ12965 1108 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 BIRC3Q13489 604 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 C1orf220Q5T0J3 134 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 KIAA0319Q5VV43 1072 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 PLPP4Q5VZY2 271 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 RNF168Q8IYW5 571 aaPredicted RBP16.71■□□□□ 0.27
DDB1-218ENST00000540784 LRRC52Q8N7C0 313 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 SUSD3Q96L08 255 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 TTPALQ9BTX7 342 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 NAT10Q9H0A0 1025 aaKnown RBP16.71■□□□□ 0.27
DDB1-218ENST00000540784 ZBP1Q9H171 429 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 SIX4Q9UIU6 781 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 NLRC5Q86WI3 1866 aa16.71■□□□□ 0.27
DDB1-218ENST00000540784 SYCE3A1L190 88 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 KPNA7A9QM74 516 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 C2CD2LO14523 706 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 URODP06132 367 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 TRIM49P0CI25 452 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 TRIM49CP0CI26 452 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 FGFR3P22607 806 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 GCLMP48507 274 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 DSG1Q02413 1049 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 SV2CQ496J9 727 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 TCERG1LQ5VWI1 586 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 SCARA3Q6AZY7 606 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.7■□□□□ 0.26
DDB1-218ENST00000540784 SV2AQ7L0J3 742 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 MICALL1Q8N3F8 863 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 APPL2Q8NEU8 664 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 CXorf38Q8TB03 319 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 ENOX1Q8TC92 643 aaKnown RBP16.7■□□□□ 0.26
DDB1-218ENST00000540784 AUTS2Q8WXX7 1259 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 RIN2Q8WYP3 895 aaPredicted RBP16.7■□□□□ 0.26
DDB1-218ENST00000540784 PPP2R3CQ969Q6 453 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 HPDLQ96IR7 371 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 B3GALT6Q96L58 329 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 ZNF560Q96MR9 790 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 DNAJC25Q9H1X3 360 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 NSUN3Q9H649 340 aaKnown RBP16.7■□□□□ 0.26
DDB1-218ENST00000540784 TLE6Q9H808 572 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 MMRN2Q9H8L6 949 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 PCDHB8Q9UN66 801 aa16.7■□□□□ 0.26
DDB1-218ENST00000540784 KIAA1671Q9BY89 1806 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms