RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 KIFC3Q9BVG8 833 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 HEMGNQ9BXL5 484 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 FOXP3Q9BZS1 431 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 KMT5AQ9NQR1 393 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 PSTPIP1O43586 416 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 CYP1A1P04798 512 aaPredicted RBP13.06□□□□□ -0.32
NPC1-202ENST00000540608 RPSAP08865 295 aaKnown RBP13.06□□□□□ -0.32
NPC1-202ENST00000540608 SKIV2L2P42285 1042 aaKnown RBP13.06□□□□□ -0.32
NPC1-202ENST00000540608 BPIFB4P59827 614 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 CCDC15Q0P6D6 951 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 ZKSCAN8Q15776 578 aaPredicted RBP13.06□□□□□ -0.32
NPC1-202ENST00000540608 IZUMO3Q5VZ72 239 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 PLA2G4FQ68DD2 849 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 CEP128Q6ZU80 1094 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 TRMT1LQ7Z2T5 733 aaKnown RBP13.06□□□□□ -0.32
NPC1-202ENST00000540608 PHLDB2Q86SQ0 1253 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 RHOT1Q8IXI2 618 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 RIBC1Q8N443 379 aaPredicted RBP13.06□□□□□ -0.32
NPC1-202ENST00000540608 SPIRE2Q8WWL2 714 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 RMDN2Q96LZ7 410 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 C15orf41Q9Y2V0 281 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 ABHD2P08910 425 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 CCNB1P14635 433 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 NSFP46459 744 aaKnown RBP13.06□□□□□ -0.32
NPC1-202ENST00000540608 JAK3P52333 1124 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 CLNS1AP54105 237 aaKnown RBP13.06□□□□□ -0.32
NPC1-202ENST00000540608 IL9RQ01113 521 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 MGAT5Q09328 741 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 MYO1EQ12965 1108 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 TMEM63BQ5T3F8 832 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 KATNAL2Q8IYT4 538 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 GPD1LQ8N335 351 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 KIF2BQ8N4N8 673 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 NSMCE1Q8WV22 266 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 MAML1Q92585 1016 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 PITPNM3Q9BZ71 974 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
NPC1-202ENST00000540608 SUFUQ9UMX1 484 aa13.06□□□□□ -0.32
NPC1-202ENST00000540608 TBC1D12O60347 775 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 KLRC2P26717 231 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 SFNP31947 248 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 FOXN2P32314 431 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 MSH2P43246 934 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 MAGEA4P43358 317 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 SLC8A3P57103 927 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 DGKZQ13574 1117 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 C15orf39Q6ZRI6 1047 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 SEPT14Q6ZU15 432 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 MON1BQ7L1V2 547 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 LARGE2Q8N3Y3 721 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 ZCCHC9Q8N567 271 aaKnown RBP13.05□□□□□ -0.32
NPC1-202ENST00000540608 SYTL5Q8TDW5 730 aaPredicted RBP13.05□□□□□ -0.32
NPC1-202ENST00000540608 C9orf72Q96LT7 481 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 OSBPL8Q9BZF1 889 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 C1orf112Q9NSG2 853 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 NOP53Q9NZM5 478 aaKnown RBP13.05□□□□□ -0.32
NPC1-202ENST00000540608 UMODL1Q5DID0 1318 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 FAM47DPA6NHR8 397 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 WDR64B1ANS9 1081 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 RASA4BC9J798 803 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 MAGEB2O15479 319 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 RASA4O43374 803 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 FDX1P10109 184 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 NR1H3Q13133 447 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 ANO5Q75V66 913 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 ECHDC2Q86YB7 292 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 CPXCR1Q8N123 301 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.05□□□□□ -0.32
NPC1-202ENST00000540608 BSNDQ8WZ55 320 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 ZNF341Q9BYN7 854 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 C17orf75Q9HAS0 396 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 HOMER2Q9NSB8 354 aa13.05□□□□□ -0.32
NPC1-202ENST00000540608 ATP9AO75110 1047 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 CCNE2O96020 404 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 GARTP22102 1010 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 TAS2R40P59535 323 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 LIN9Q5TKA1 542 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 DAB2IPQ5VWQ8 1189 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 LLGL2Q6P1M3 1020 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 MAB21L3Q8N8X9 362 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 EXD1Q8NHP7 514 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 ZNF516Q92618 1163 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 RBM15Q96T37 977 aaKnown RBP eCLIP13.04□□□□□ -0.327e-7■■■□□ 17.8
NPC1-202ENST00000540608 UBN1Q9NPG3 1134 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 MAP3K20Q9NYL2 800 aaKnown RBP13.04□□□□□ -0.32
NPC1-202ENST00000540608 PGAP2Q9UHJ9 254 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 WDR4P57081 412 aaKnown RBP13.04□□□□□ -0.32
NPC1-202ENST00000540608 KRT76Q01546 638 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 LMNB2Q03252 620 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 C2CD6Q53TS8 623 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 BRDTQ58F21 947 aaPredicted RBP13.04□□□□□ -0.32
NPC1-202ENST00000540608 SAMD3Q8N6K7 520 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 PRCCQ92733 491 aaPredicted RBP13.04□□□□□ -0.32
NPC1-202ENST00000540608 CFAP57Q96MR6 1250 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 TAAR1Q96RJ0 339 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 FAM118BQ9BPY3 351 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 MRPL47Q9HD33 250 aaKnown RBP13.04□□□□□ -0.32
NPC1-202ENST00000540608 STK38LQ9Y2H1 464 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 STARD13Q9Y3M8 1113 aa13.04□□□□□ -0.32
NPC1-202ENST00000540608 GSTTP1A0A1W2PQM5 241 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms