RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 MAMDC4Q6UXC1 1216 aa8.22□□□□□ -1.09
TRAV11-201ENST00000539512 SPATA31D4Q6ZUB0 917 aa8.22□□□□□ -1.09
TRAV11-201ENST00000539512 PCSK9Q8NBP7 692 aaKnown RBP8.22□□□□□ -1.09
TRAV11-201ENST00000539512 CXorf38Q8TB03 319 aa8.22□□□□□ -1.09
TRAV11-201ENST00000539512 RBM15Q96T37 977 aaKnown RBP eCLIP8.22□□□□□ -1.09
TRAV11-201ENST00000539512 SSBP3Q9BWW4 388 aaPredicted RBP8.22□□□□□ -1.09
TRAV11-201ENST00000539512 NUP62CLQ9H1M0 184 aa8.22□□□□□ -1.09
TRAV11-201ENST00000539512 BHMT2Q9H2M3 363 aa8.22□□□□□ -1.09
TRAV11-201ENST00000539512 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.22□□□□□ -1.09
TRAV11-201ENST00000539512 ANO9A1A5B4 782 aa8.21□□□□□ -1.1
TRAV11-201ENST00000539512 DRGXA6NNA5 263 aa8.21□□□□□ -1.1
TRAV11-201ENST00000539512 ZNF785A8K8V0 405 aa8.21□□□□□ -1.1
TRAV11-201ENST00000539512 AGFG2O95081 481 aa8.21□□□□□ -1.1
TRAV11-201ENST00000539512 MAP4K4O95819 1239 aaPredicted RBP8.21□□□□□ -1.1
TRAV11-201ENST00000539512 KITP10721 976 aa8.21□□□□□ -1.1
TRAV11-201ENST00000539512 PHKA1P46020 1223 aa8.21□□□□□ -1.1
TRAV11-201ENST00000539512 MXRA7P84157 204 aa8.21□□□□□ -1.1
TRAV11-201ENST00000539512 EXOSC9Q06265 439 aaKnown RBP8.21□□□□□ -1.1
TRAV11-201ENST00000539512 OS9Q13438 667 aaPredicted RBP8.21□□□□□ -1.1
TRAV11-201ENST00000539512 GALEQ14376 348 aa8.21□□□□□ -1.1
TRAV11-201ENST00000539512 PDSS2Q86YH6 399 aa8.21□□□□□ -1.1
TRAV11-201ENST00000539512 EDAQ92838 391 aa8.21□□□□□ -1.1
TRAV11-201ENST00000539512 KIAA1586Q9HCI6 787 aa8.21□□□□□ -1.1
TRAV11-201ENST00000539512 APAF1O14727 1248 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 PMM2O15305 246 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 FRS3O43559 492 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 BRAFP15056 766 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 SLC6A2P23975 617 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 NHLH2Q02577 135 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 SEMA5AQ13591 1074 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 SLC44A4Q53GD3 710 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 SPTY2D1Q68D10 685 aaPredicted RBP8.2□□□□□ -1.1
TRAV11-201ENST00000539512 Q6ZRM9 215 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 TTC9BQ8N6N2 239 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 DDX17Q92841 729 aaKnown RBP8.2□□□□□ -1.1
TRAV11-201ENST00000539512 SUCLG2Q96I99 432 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 DCLRE1CQ96SD1 692 aaKnown RBP8.2□□□□□ -1.1
TRAV11-201ENST00000539512 CDK5RAP1Q96SZ6 601 aaKnown RBP8.2□□□□□ -1.1
TRAV11-201ENST00000539512 IMPG2Q9BZV3 1241 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 ZNF287Q9HBT7 754 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 AURKAIP1Q9NWT8 199 aaPredicted RBP8.2□□□□□ -1.1
TRAV11-201ENST00000539512 SMPD4Q9NXE4 827 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 ATP11BQ9Y2G3 1177 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 SNX13Q9Y5W8 968 aa8.2□□□□□ -1.1
TRAV11-201ENST00000539512 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.2□□□□□ -1.1
TRAV11-201ENST00000539512 MUSKO15146 869 aa8.19□□□□□ -1.1
TRAV11-201ENST00000539512 CHEK2O96017 543 aa8.19□□□□□ -1.1
TRAV11-201ENST00000539512 APOBEC3AP31941 199 aaPredicted RBP8.19□□□□□ -1.1
TRAV11-201ENST00000539512 RABGGTBP53611 331 aa8.19□□□□□ -1.1
TRAV11-201ENST00000539512 IFIT5Q13325 482 aaKnown RBP8.19□□□□□ -1.1
TRAV11-201ENST00000539512 KIF22Q14807 665 aa8.19□□□□□ -1.1
TRAV11-201ENST00000539512 FOXR2Q6PJQ5 311 aa8.19□□□□□ -1.1
TRAV11-201ENST00000539512 APOA5Q6Q788 366 aa8.19□□□□□ -1.1
TRAV11-201ENST00000539512 ZNF783Q6ZMS7 281 aa8.19□□□□□ -1.1
TRAV11-201ENST00000539512 SLC17A8Q8NDX2 589 aa8.19□□□□□ -1.1
TRAV11-201ENST00000539512 OR6B3Q8NGW1 331 aa8.19□□□□□ -1.1
TRAV11-201ENST00000539512 FBXO41Q8TF61 875 aa8.19□□□□□ -1.1
TRAV11-201ENST00000539512 NUP133Q8WUM0 1156 aa8.19□□□□□ -1.1
TRAV11-201ENST00000539512 C22orf23Q9BZE7 217 aa8.19□□□□□ -1.1
TRAV11-201ENST00000539512 DIRC3C9JPN6 131 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 MYO1CO00159 1063 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 MATN4O95460 622 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 CKBP12277 381 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 RPL17P18621 184 aaKnown RBP8.18□□□□□ -1.1
TRAV11-201ENST00000539512 SCNN1GP51170 649 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 ZNF135P52742 658 aaPredicted RBP8.18□□□□□ -1.1
TRAV11-201ENST00000539512 PIGFQ07326 219 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 UBE4AQ14139 1066 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 FBLN7Q53RD9 439 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 EMC10Q5UCC4 262 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 TSHZ3Q63HK5 1081 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 NAIF1Q69YI7 327 aaPredicted RBP8.18□□□□□ -1.1
TRAV11-201ENST00000539512 IL31Q6EBC2 164 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 SWSAP1Q6NVH7 229 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 Q6ZSN1 163 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 CELF5Q8N6W0 485 aaKnown RBP8.18□□□□□ -1.1
TRAV11-201ENST00000539512 IL31RAQ8NI17 732 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 SCAMP4Q969E2 229 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 TNIP3Q96KP6 325 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 C8orf49Q96NF6 230 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 APOL5Q9BWW9 433 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 KLC2Q9H0B6 622 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 RNPEPQ9H4A4 650 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 SRRDQ9UH36 339 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 SORCS3Q9UPU3 1222 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 CDYLQ9Y232 598 aa8.18□□□□□ -1.1
TRAV11-201ENST00000539512 USP15Q9Y4E8 981 aaPredicted RBP8.18□□□□□ -1.1
TRAV11-201ENST00000539512 RHPN2P1A8MT19 583 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 ISM1B1AKI9 464 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 TBC1D4O60343 1298 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 ERN1O75460 977 aaKnown RBP8.17□□□□□ -1.1
TRAV11-201ENST00000539512 SCAF4O95104 1147 aaKnown RBP8.17□□□□□ -1.1
TRAV11-201ENST00000539512 MYF5P13349 255 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 NPR1P16066 1061 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 HDCP19113 662 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 ACRV1P26436 265 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 SLC6A4P31645 630 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 NEK3P51956 506 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 RNASE9P60153 205 aaKnown RBP8.17□□□□□ -1.1
TRAV11-201ENST00000539512 RRP1BQ14684 758 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms