RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 MTRF1LQ9UGC7 380 aaKnown RBP13.38□□□□□ -0.27
SFSWAP-208ENST00000539506 PCDHA10Q9Y5I2 948 aa13.38□□□□□ -0.27
SFSWAP-208ENST00000539506 DOCK5Q9H7D0 1870 aa13.38□□□□□ -0.27
SFSWAP-208ENST00000539506 ASAP2O43150 1006 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 BRAFP15056 766 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 TARSP26639 723 aaKnown RBP13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 SFNP31947 248 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 COILP38432 576 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 MGAT5Q09328 741 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 CRYMQ14894 314 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 CYP1B1Q16678 543 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 ZNF772Q68DY9 489 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 CCDC60Q8IWA6 550 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 REPS2Q8NFH8 660 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 ZNF526Q8TF50 670 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 ZBTB10Q96DT7 871 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 FAM213AQ9BRX8 229 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 HAPLN2Q9GZV7 340 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 MAP3K20Q9NYL2 800 aaKnown RBP13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 GTF3C4Q9UKN8 822 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 PTPRJQ12913 1337 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 O00370 1275 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 NUDT17P0C025 328 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 GHRP10912 638 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 VTI1AQ96AJ9 217 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 TGS1Q96RS0 853 aaKnown RBP13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 IWS1Q96ST2 819 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 SLCO1B3Q9NPD5 702 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 CHST7Q9NS84 486 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 RASAL2Q9UJF2 1139 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 WDR81Q562E7 1941 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 STX2P32856 288 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 ACAD10Q6JQN1 1059 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 ARMC9Q7Z3E5 817 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 CPA5Q8WXQ8 436 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 PGM2Q96G03 612 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 NT5C1BQ96P26 610 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 HAO1Q9UJM8 370 aa13.37□□□□□ -0.27
SFSWAP-208ENST00000539506 UNGP13051 313 aaPredicted RBP13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 MSH2P43246 934 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 SSR1P43307 286 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 PDE6CP51160 858 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 COPS2P61201 443 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 SP2Q02086 613 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 FSTL1Q12841 308 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 PPP2R5EQ16537 467 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 CLEC16AQ2KHT3 1053 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 THEMIS2Q5TEJ8 643 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 CIAPIN1Q6FI81 312 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 SPOPLQ6IQ16 392 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 VSTM1Q6UX27 236 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 C15orf39Q6ZRI6 1047 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 EXOC7Q9UPT5 735 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 WDR91A4D1P6 747 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 HNRNPDLO14979 420 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 ZBED4O75132 1171 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 KRT5P13647 590 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 CALCOCO2Q13137 446 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 DNAJC3Q13217 504 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 SEL1L2Q5TEA6 688 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 CYFIP1Q7L576 1253 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 SPATA21Q7Z572 469 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 NLRX1Q86UT6 975 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 SAMD3Q8N6K7 520 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 L3MBTL3Q96JM7 780 aaPredicted RBP13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 SENP7Q9BQF6 1050 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 ZCWPW1Q9H0M4 648 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 C12orf65Q9H3J6 166 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 NOP53Q9NZM5 478 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 ADAM22Q9P0K1 906 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 PARP14Q460N5 1801 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 MROH7Q68CQ1 1323 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 MYPNQ86TC9 1320 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 RLFQ13129 1914 aa13.36□□□□□ -0.27
SFSWAP-208ENST00000539506 AGTP01019 485 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 RXRBP28702 533 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 KRT17Q04695 432 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 ADCY2Q08462 1091 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 TAF11Q15544 211 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 RFX8Q6ZV50 586 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 AAASQ9NRG9 546 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 KLHL11Q9NVR0 708 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 TCEAL9Q9UHQ7 104 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 ZNF214Q9UL59 606 aaPredicted RBP13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 GSTTP1A0A1W2PQM5 241 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 PEX10O60683 326 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 SUN1O94901 812 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 EDN1P05305 212 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 ATP4AP20648 1035 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 SPDYCQ5MJ68 293 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 ANKRD20A2Q5SQ80 823 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 ZBTB41Q5SVQ8 909 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 ANKRD20A1Q5TYW2 823 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 ANKRD20A3Q5VUR7 823 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 SNRNP48Q6IEG0 339 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 GPD1LQ8N335 351 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 C3orf20Q8ND61 904 aa13.35□□□□□ -0.27
SFSWAP-208ENST00000539506 ART4Q93070 314 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms