RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 PPM1NQ8N819 430 aa7.07□□□□□ -1.28
CCDC7-209ENST00000539197 CHAC2Q8WUX2 184 aa7.07□□□□□ -1.28
CCDC7-209ENST00000539197 FAM126AQ9BYI3 521 aaPredicted RBP7.07□□□□□ -1.28
CCDC7-209ENST00000539197 ORC4O43929 436 aa7.06□□□□□ -1.28
CCDC7-209ENST00000539197 SBK3P0C264 359 aa7.06□□□□□ -1.28
CCDC7-209ENST00000539197 CREMQ03060 361 aa7.06□□□□□ -1.28
CCDC7-209ENST00000539197 TSHZ1Q6ZSZ6 1077 aa7.06□□□□□ -1.28
CCDC7-209ENST00000539197 GRASPQ7Z6J2 395 aaPredicted RBP7.06□□□□□ -1.28
CCDC7-209ENST00000539197 UROC1Q96N76 676 aa7.06□□□□□ -1.28
CCDC7-209ENST00000539197 CGB1A6NKQ9 187 aa7.05□□□□□ -1.28
CCDC7-209ENST00000539197 YY2O15391 372 aa7.05□□□□□ -1.28
CCDC7-209ENST00000539197 ERBB2P04626 1255 aa7.05□□□□□ -1.28
CCDC7-209ENST00000539197 ELFN1P0C7U0 828 aa7.05□□□□□ -1.28
CCDC7-209ENST00000539197 ABCG1P45844 678 aa7.05□□□□□ -1.28
CCDC7-209ENST00000539197 ATP2B3Q16720 1220 aa7.05□□□□□ -1.28
CCDC7-209ENST00000539197 SH2D3CQ8N5H7 860 aa7.05□□□□□ -1.28
CCDC7-209ENST00000539197 NRG4Q8WWG1 115 aa7.05□□□□□ -1.28
CCDC7-209ENST00000539197 TMEM125Q96AQ2 219 aa7.05□□□□□ -1.28
CCDC7-209ENST00000539197 KMT5AQ9NQR1 393 aa7.05□□□□□ -1.28
CCDC7-209ENST00000539197 ARPP21Q9UBL0 812 aaPredicted RBP7.05□□□□□ -1.28
CCDC7-209ENST00000539197 GPR45Q9Y5Y3 372 aa7.05□□□□□ -1.28
CCDC7-209ENST00000539197 CCDC151A5D8V7 595 aa7.04□□□□□ -1.28
CCDC7-209ENST00000539197 DNAJC9-AS1A6NH13 148 aa7.04□□□□□ -1.28
CCDC7-209ENST00000539197 GATA3P23771 443 aa7.04□□□□□ -1.28
CCDC7-209ENST00000539197 ERVK-21P61565 698 aa7.04□□□□□ -1.28
CCDC7-209ENST00000539197 CT47A1Q5JQC4 288 aaPredicted RBP7.04□□□□□ -1.28
CCDC7-209ENST00000539197 NOP9Q86U38 636 aaKnown RBP7.04□□□□□ -1.28
CCDC7-209ENST00000539197 RHOT1Q8IXI2 618 aa7.04□□□□□ -1.28
CCDC7-209ENST00000539197 NLGN4YQ8NFZ3 816 aaPredicted RBP7.04□□□□□ -1.28
CCDC7-209ENST00000539197 TFAP2BQ92481 460 aa7.04□□□□□ -1.28
CCDC7-209ENST00000539197 ANKS1AQ92625 1134 aa7.04□□□□□ -1.28
CCDC7-209ENST00000539197 SLKQ9H2G2 1235 aaPredicted RBP7.04□□□□□ -1.28
CCDC7-209ENST00000539197 RNF7Q9UBF6 113 aa7.04□□□□□ -1.28
CCDC7-209ENST00000539197 INTUQ9ULD6 942 aa7.04□□□□□ -1.28
CCDC7-209ENST00000539197 GPR39O43194 453 aa7.03□□□□□ -1.28
CCDC7-209ENST00000539197 MAPK10P53779 464 aa7.03□□□□□ -1.28
CCDC7-209ENST00000539197 SRSF4Q08170 494 aaKnown RBP7.03□□□□□ -1.28
CCDC7-209ENST00000539197 KIAA0895LQ68EN5 471 aa7.03□□□□□ -1.28
CCDC7-209ENST00000539197 VWA1Q6PCB0 445 aa7.03□□□□□ -1.28
CCDC7-209ENST00000539197 PEG10Q86TG7 708 aaKnown RBP7.03□□□□□ -1.28
CCDC7-209ENST00000539197 NSUN7Q8NE18 718 aaKnown RBP7.03□□□□□ -1.28
CCDC7-209ENST00000539197 SLC30A5Q8TAD4 765 aa7.03□□□□□ -1.28
CCDC7-209ENST00000539197 LPIN2Q92539 896 aa7.03□□□□□ -1.28
CCDC7-209ENST00000539197 SMG7Q92540 1137 aaKnown RBP7.03□□□□□ -1.28
CCDC7-209ENST00000539197 TIMP4Q99727 224 aa7.03□□□□□ -1.28
CCDC7-209ENST00000539197 SLC29A3Q9BZD2 475 aa7.03□□□□□ -1.28
CCDC7-209ENST00000539197 C11orf54Q9H0W9 315 aaPredicted RBP7.03□□□□□ -1.28
CCDC7-209ENST00000539197 MPPED1O15442 326 aa7.02□□□□□ -1.29
CCDC7-209ENST00000539197 SRGNP10124 158 aa7.02□□□□□ -1.29
CCDC7-209ENST00000539197 CPEP16870 476 aa7.02□□□□□ -1.29
CCDC7-209ENST00000539197 TARDBPQ13148 414 aaKnown RBP eCLIP7.02□□□□□ -1.29
CCDC7-209ENST00000539197 CD300EQ496F6 205 aaPredicted RBP7.02□□□□□ -1.29
CCDC7-209ENST00000539197 DACT2Q5SW24 774 aa7.02□□□□□ -1.29
CCDC7-209ENST00000539197 KAZNQ674X7 775 aa7.02□□□□□ -1.29
CCDC7-209ENST00000539197 ZNF788Q6ZQV5 615 aa7.02□□□□□ -1.29
CCDC7-209ENST00000539197 C7orf25Q9BPX7 421 aa7.02□□□□□ -1.29
CCDC7-209ENST00000539197 CDYLQ9Y232 598 aa7.02□□□□□ -1.29
CCDC7-209ENST00000539197 ENTPD2Q9Y5L3 495 aa7.02□□□□□ -1.29
CCDC7-209ENST00000539197 A0A1W2PS29 197 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 TLDC2A0PJX2 215 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 HAUS5O94927 633 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 AGFG2O95081 481 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 AGXTP21549 392 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 GPD1P21695 349 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 FLYWCH1Q4VC44 716 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 CLNKQ7Z7G1 428 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 WDR66Q8TBY9 1149 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 DDB2Q92466 427 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 FBXL20Q96IG2 436 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 CPNE5Q9HCH3 593 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 ZNF277Q9NRM2 450 aaPredicted RBP7.01□□□□□ -1.29
CCDC7-209ENST00000539197 INTS13Q9NVM9 706 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 SLC45A2Q9UMX9 530 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 PCDHA13Q9Y5I0 950 aa7.01□□□□□ -1.29
CCDC7-209ENST00000539197 PRAMEF33A0A0G2JMD5 474 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 WIPF3A6NGB9 483 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 GRM6O15303 877 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 PRAMEF10O60809 474 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 CTXN1P60606 82 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 MC2RQ01718 297 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 NBPF8Q3BBV2 869 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 UTP14CQ5TAP6 766 aaKnown RBP7□□□□□ -1.29
CCDC7-209ENST00000539197 GIMAP6Q6P9H5 292 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 PTF1AQ7RTS3 328 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 FBXO41Q8TF61 875 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 SARAFQ96BY9 339 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 LRIG1Q96JA1 1093 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 CTTNBP2NLQ9P2B4 639 aa7□□□□□ -1.29
CCDC7-209ENST00000539197 PROM1O43490 865 aa6.99□□□□□ -1.29
CCDC7-209ENST00000539197 WT1P19544 449 aaPredicted RBP6.99□□□□□ -1.29
CCDC7-209ENST00000539197 POU3F3P20264 500 aaPredicted RBP6.99□□□□□ -1.29
CCDC7-209ENST00000539197 GRIA3P42263 894 aa6.99□□□□□ -1.29
CCDC7-209ENST00000539197 ZNF280AP59817 542 aaPredicted RBP6.99□□□□□ -1.29
CCDC7-209ENST00000539197 RPS7P62081 194 aaKnown RBP6.99□□□□□ -1.29
CCDC7-209ENST00000539197 FPGSQ05932 587 aa6.99□□□□□ -1.29
CCDC7-209ENST00000539197 TSTD2Q5T7W7 516 aa6.99□□□□□ -1.29
CCDC7-209ENST00000539197 MICALCLQ6ZW33 695 aa6.99□□□□□ -1.29
CCDC7-209ENST00000539197 TMX3Q96JJ7 454 aa6.99□□□□□ -1.29
CCDC7-209ENST00000539197 KLHL32Q96NJ5 620 aa6.99□□□□□ -1.29
CCDC7-209ENST00000539197 TUBD1Q9UJT1 453 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms