RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 PRPF4O43172 522 aaKnown RBP eCLIP7.39□□□□□ -1.23
PROM1-219ENST00000539194 EXTL3O43909 919 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 TYROBPO43914 113 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 TCF4P15884 667 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 SCP2P22307 547 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 FOXN2P32314 431 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 PDE6CP51160 858 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 WDR4P57081 412 aaKnown RBP7.39□□□□□ -1.23
PROM1-219ENST00000539194 LONRF1Q17RB8 773 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 MSL1Q68DK7 614 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 ABRAQ8N0Z2 381 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 ARFGAP1Q8N6T3 406 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 C1orf54Q8WWF1 131 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 PWWP2AQ96N64 755 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 NCAPGQ9BPX3 1015 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 A0A0B4J269 797 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 LIASO43766 372 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 ATP6V1G2O95670 118 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 TAC1P20366 129 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 MMP8P22894 467 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 ICAM3P32942 547 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 SKIV2L2P42285 1042 aaKnown RBP7.39□□□□□ -1.23
PROM1-219ENST00000539194 OAZ1P54368 228 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 OGDHQ02218 1023 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 GRM1Q13255 1194 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 SPDYAQ5MJ70 313 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 RNF43Q68DV7 783 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 MAEAQ7L5Y9 396 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 PPM1KQ8N3J5 372 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 FITM2Q8N6M3 262 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 CCDC197Q8NCU1 140 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 ATL2Q8NHH9 583 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 EXD1Q8NHP7 514 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 PI4K2AQ9BTU6 479 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 NIFKQ9BYG3 293 aaKnown RBP7.39□□□□□ -1.23
PROM1-219ENST00000539194 ZNF341Q9BYN7 854 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 FETUBQ9UGM5 382 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 PCDHA10Q9Y5I2 948 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 TMEM191CA6NGB0 347 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 RGS16O15492 202 aaPredicted RBP7.38□□□□□ -1.23
PROM1-219ENST00000539194 TMEM191BP0C7N4 346 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 NLRP11P59045 1033 aaKnown RBP7.38□□□□□ -1.23
PROM1-219ENST00000539194 C1QBPQ07021 282 aaKnown RBP7.38□□□□□ -1.23
PROM1-219ENST00000539194 CETN1Q12798 172 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 LRRC38Q5VT99 294 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 NT5C1BQ96P26 610 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 CAMKK2Q96RR4 588 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 PCYT2Q99447 389 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 RAVER2Q9HCJ3 691 aaKnown RBP7.38□□□□□ -1.23
PROM1-219ENST00000539194 CYP26B1Q9NR63 512 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 TMEM120BA0PK00 339 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 KIAA0754O94854 1291 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 RXRBP28702 533 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 DLGAP5Q15398 846 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 CTC1Q2NKJ3 1217 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 ZBTB41Q5SVQ8 909 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 NSMFQ6X4W1 530 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 CCDC121Q6ZUS5 278 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 RMDN2Q96LZ7 410 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 INTS9Q9NV88 658 aaKnown RBP7.38□□□□□ -1.23
PROM1-219ENST00000539194 ANAPC7Q9UJX3 599 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 EXOC7Q9UPT5 735 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 PTPN22Q9Y2R2 807 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 FAM170AA1A519 330 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 E7ESA3 106 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 DGAT1O75907 488 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 RALAP11233 206 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 PROZP22891 400 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 GTF2A1P52655 376 aaPredicted RBP7.38□□□□□ -1.23
PROM1-219ENST00000539194 MTFR1Q15390 333 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 MIS18BP1Q6P0N0 1132 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 CYP4V2Q6ZWL3 525 aaPredicted RBP7.38□□□□□ -1.23
PROM1-219ENST00000539194 TRABD2AQ86V40 505 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 ALLCQ8N6M5 410 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 CPA5Q8WXQ8 436 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 NKD2Q969F2 451 aaPredicted RBP7.38□□□□□ -1.23
PROM1-219ENST00000539194 MAGEB18Q96M61 343 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 SLITRK1Q96PX8 696 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 PORCNQ9H237 461 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 BCCIPQ9P287 314 aaKnown RBP eCLIP7.38□□□□□ -1.23
PROM1-219ENST00000539194 MTRF1LQ9UGC7 380 aaKnown RBP7.38□□□□□ -1.23
PROM1-219ENST00000539194 NAALADL1Q9UQQ1 740 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 DRG1Q9Y295 367 aaKnown RBP7.38□□□□□ -1.23
PROM1-219ENST00000539194 NUB1Q9Y5A7 615 aa7.38□□□□□ -1.23
PROM1-219ENST00000539194 ZNF638Q14966 1978 aaKnown RBP7.37□□□□□ -1.23
PROM1-219ENST00000539194 TTLL13PA6NNM8 815 aa7.37□□□□□ -1.23
PROM1-219ENST00000539194 ZBTB42B2RXF5 422 aa7.37□□□□□ -1.23
PROM1-219ENST00000539194 DMP1Q13316 513 aaPredicted RBP7.37□□□□□ -1.23
PROM1-219ENST00000539194 SGO2Q562F6 1265 aa7.37□□□□□ -1.23
PROM1-219ENST00000539194 RNASEH2BQ5TBB1 312 aaKnown RBP7.37□□□□□ -1.23
PROM1-219ENST00000539194 CCDC105Q8IYK2 499 aa7.37□□□□□ -1.23
PROM1-219ENST00000539194 RTKN2Q8IZC4 609 aa7.37□□□□□ -1.23
PROM1-219ENST00000539194 SLC35B2Q8TB61 432 aa7.37□□□□□ -1.23
PROM1-219ENST00000539194 FOXP3Q9BZS1 431 aa7.37□□□□□ -1.23
PROM1-219ENST00000539194 SSU72Q9NP77 194 aaKnown RBP7.37□□□□□ -1.23
PROM1-219ENST00000539194 MTUS1Q9ULD2 1270 aa7.37□□□□□ -1.23
PROM1-219ENST00000539194 USP15Q9Y4E8 981 aaPredicted RBP7.37□□□□□ -1.23
PROM1-219ENST00000539194 POLR2AP24928 1970 aaKnown RBP7.37□□□□□ -1.23
PROM1-219ENST00000539194 SBF1O95248 1867 aa7.37□□□□□ -1.23
PROM1-219ENST00000539194 TRAFD1O14545 582 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms