RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 EPS15L1Q9UBC2 864 aa16.28■□□□□ 0.2
RAB40B-202ENST00000538809 UBQLN1Q9UMX0 589 aaKnown RBP16.28■□□□□ 0.2
RAB40B-202ENST00000538809 DUSP12Q9UNI6 340 aa16.28■□□□□ 0.2
RAB40B-202ENST00000538809 FRMD3A2A2Y4 597 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 PPEF2O14830 753 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 XYLBO75191 536 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 HSP90AA1P07900 732 aaKnown RBP16.27■□□□□ 0.2
RAB40B-202ENST00000538809 NFICP08651 508 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 IDEP14735 1019 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 LRPAP1P30533 357 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 ACOT2P49753 483 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 NHLH1Q02575 133 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 E2F4Q16254 413 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 KYAT1Q16773 422 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 FOXD4L6Q3SYB3 417 aaPredicted RBP16.27■□□□□ 0.2
RAB40B-202ENST00000538809 CTXN3Q4LDR2 81 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 JADE1Q6IE81 842 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 SLC8B1Q6J4K2 584 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 FOXD4L3Q6VB84 417 aaPredicted RBP16.27■□□□□ 0.2
RAB40B-202ENST00000538809 KCNH6Q9H252 994 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 MRPL44Q9H9J2 332 aaKnown RBP16.27■□□□□ 0.2
RAB40B-202ENST00000538809 IGSF9Q9P2J2 1179 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 FBXL5Q9UKA1 691 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 CPSF3Q9UKF6 684 aaKnown RBP16.27■□□□□ 0.2
RAB40B-202ENST00000538809 PCDHB8Q9UN66 801 aa16.27■□□□□ 0.2
RAB40B-202ENST00000538809 COL4A3Q01955 1670 aa16.27■□□□□ 0.19
RAB40B-202ENST00000538809 DENND4CQ5VZ89 1909 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 H7C4K7 107 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 TBC1D4O60343 1298 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 ADRB2P07550 413 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 LAMP2P13473 410 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 AVPR2P30518 371 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 ABCD1P33897 745 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 CASP5P51878 434 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 KCNA1Q09470 495 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 MRPL58Q14197 206 aaKnown RBP16.26■□□□□ 0.19
RAB40B-202ENST00000538809 ZBTB6Q15916 424 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 ADALQ6DHV7 355 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 ZNF280DQ6N043 979 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 SHC4Q6S5L8 630 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 ZNF720Q7Z2F6 126 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 SPRYD3Q8NCJ5 442 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 ITFG1Q8TB96 612 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 FGFBP2Q9BYJ0 223 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 MFSD1Q9H3U5 465 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.26■□□□□ 0.192e-6■■■■□ 24.3
RAB40B-202ENST00000538809 SEL1LQ9UBV2 794 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 FBXL21Q9UKT6 434 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 TIMM13Q9Y5L4 95 aaPredicted RBP16.26■□□□□ 0.19
RAB40B-202ENST00000538809 STYXL1Q9Y6J8 313 aa16.26■□□□□ 0.19
RAB40B-202ENST00000538809 PRRG1O14668 218 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 XPOTO43592 962 aaKnown RBP16.25■□□□□ 0.19
RAB40B-202ENST00000538809 CUTAO60888 179 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 GCNT3O95395 438 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 SEC24AO95486 1093 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 CFHP08603 1231 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 GAP43P17677 238 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 CYP3A5P20815 502 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 HTR4Q13639 388 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 TMEM132DQ14C87 1099 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 UVSSAQ2YD98 709 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 PABPC1LQ4VXU2 614 aaKnown RBP16.25■□□□□ 0.19
RAB40B-202ENST00000538809 ATL3Q6DD88 541 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 APPL2Q8NEU8 664 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 ZNF461Q8TAF7 563 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 ING5Q8WYH8 240 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 POMGNT1Q8WZA1 660 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 HVCN1Q96D96 273 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 OLFML3Q9NRN5 406 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 DNMT3BQ9UBC3 853 aaKnown RBP16.25■□□□□ 0.19
RAB40B-202ENST00000538809 AGO2Q9UKV8 859 aaKnown RBP16.25■□□□□ 0.19
RAB40B-202ENST00000538809 NUMBLQ9Y6R0 609 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 ZNF638Q14966 1978 aaKnown RBP16.25■□□□□ 0.19
RAB40B-202ENST00000538809 TICRRQ7Z2Z1 1910 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 OBSL1O75147 1896 aa16.25■□□□□ 0.19
RAB40B-202ENST00000538809 M0QZQ0 153 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 ABLIM3O94929 683 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 POU2F2P09086 479 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 CPB1P15086 417 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 ELF1P32519 619 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 TCF15Q12870 199 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 L1TD1Q5T7N2 865 aaKnown RBP16.24■□□□□ 0.19
RAB40B-202ENST00000538809 SPATA1Q5VX52 437 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 CWF19L1Q69YN2 538 aaKnown RBP16.24■□□□□ 0.19
RAB40B-202ENST00000538809 DSTYKQ6XUX3 929 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 TMEM105Q8N8V8 129 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 FLCNQ8NFG4 579 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 BEST2Q8NFU1 509 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 FGF13Q92913 245 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 CYP4F11Q9HBI6 524 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 PANK4Q9NVE7 773 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 KBTBD4Q9NVX7 518 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 CDH7Q9ULB5 785 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 ZDHHC9Q9Y397 364 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 INSL5Q9Y5Q6 135 aa16.24■□□□□ 0.19
RAB40B-202ENST00000538809 NUP210Q8TEM1 1887 aaPredicted RBP16.24■□□□□ 0.19
RAB40B-202ENST00000538809 ARHGEF37A1IGU5 675 aa16.23■□□□□ 0.19
RAB40B-202ENST00000538809 ANHXE9PGG2 379 aa16.23■□□□□ 0.19
RAB40B-202ENST00000538809 TULP1O00294 542 aaPredicted RBP16.23■□□□□ 0.19
RAB40B-202ENST00000538809 LRG1P02750 347 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms