RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 MRPL42Q9Y6G3 142 aaKnown RBP18.58■□□□□ 0.57
CLN6-202ENST00000538696 TPM1P09493 284 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 TMEM191BP0C7N4 346 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 SKILP12757 684 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 MYOGP15173 224 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 RNASELQ05823 741 aaKnown RBP18.57■□□□□ 0.56
CLN6-202ENST00000538696 TUSC3Q13454 348 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 TMEM139Q8IV31 216 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 COLGALT2Q8IYK4 626 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 BEST2Q8NFU1 509 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 ANKRD36BP1Q96IX9 119 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 CRACR2AQ9BSW2 395 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 NUP58Q9BVL2 599 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 MMRN2Q9H8L6 949 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 DNAJB4Q9UDY4 337 aa18.57■□□□□ 0.56
CLN6-202ENST00000538696 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.56■□□□□ 0.56
CLN6-202ENST00000538696 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.56■□□□□ 0.56
CLN6-202ENST00000538696 CASTOR2A6NHX0 329 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 XPOTO43592 962 aaKnown RBP18.56■□□□□ 0.56
CLN6-202ENST00000538696 ARHGEF15O94989 841 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 TNNC2P02585 160 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 LINC00271P0C7V0 271 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 CYP3A5P20815 502 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 MSNP26038 577 aaKnown RBP18.56■□□□□ 0.56
CLN6-202ENST00000538696 GCLMP48507 274 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 DUOXA2Q1HG44 320 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 FIGNQ5HY92 759 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 SCARA3Q6AZY7 606 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 CNGA4Q8IV77 575 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 C17orf53Q8N3J3 647 aaPredicted RBP18.56■□□□□ 0.56
CLN6-202ENST00000538696 C1orf127Q8N9H9 656 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 FAM207AQ9NSI2 230 aaPredicted RBP18.56■□□□□ 0.56
CLN6-202ENST00000538696 DPP3Q9NY33 737 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 CAPN11Q9UMQ6 739 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 YBX2Q9Y2T7 364 aaKnown RBP18.56■□□□□ 0.56
CLN6-202ENST00000538696 PCDHA11Q9Y5I1 949 aa18.56■□□□□ 0.56
CLN6-202ENST00000538696 C4BPAP04003 597 aaKnown RBP18.55■□□□□ 0.56
CLN6-202ENST00000538696 TRIM21P19474 475 aaKnown RBP18.55■□□□□ 0.56
CLN6-202ENST00000538696 LRPAP1P30533 357 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 GTF2H1P32780 548 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 KRT9P35527 623 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 PBX2P40425 430 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 FMO5P49326 533 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 AP3M2P53677 418 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 APBA1Q02410 837 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 ZACNQ401N2 412 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 CBWD6Q4V339 395 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 CBWD3Q5JTY5 395 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 CBWD5Q5RIA9 395 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 PRPF38BQ5VTL8 546 aaKnown RBP18.55■□□□□ 0.56
CLN6-202ENST00000538696 TDRD10Q5VZ19 366 aaKnown RBP18.55■□□□□ 0.56
CLN6-202ENST00000538696 C15orf39Q6ZRI6 1047 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 SV2AQ7L0J3 742 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 TRAPPC11Q7Z392 1133 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 FIBCD1Q8N539 461 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 CCDC112Q8NEF3 446 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 CXorf38Q8TB03 319 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 FAM193BQ96PV7 902 aaPredicted RBP18.55■□□□□ 0.56
CLN6-202ENST00000538696 PANX2Q96RD6 677 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 PAAF1Q9BRP4 392 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 TMEM175Q9BSA9 504 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 PBX4Q9BYU1 374 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 SIX4Q9UIU6 781 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 COLQQ9Y215 455 aaPredicted RBP18.55■□□□□ 0.56
CLN6-202ENST00000538696 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.55■□□□□ 0.56
CLN6-202ENST00000538696 PLXNA4Q9HCM2 1894 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 TSC2P49815 1807 aa18.55■□□□□ 0.56
CLN6-202ENST00000538696 PPEF2O14830 753 aa18.54■□□□□ 0.56
CLN6-202ENST00000538696 STX10O60499 249 aa18.54■□□□□ 0.56
CLN6-202ENST00000538696 ZC3H11AO75152 810 aaKnown RBP eCLIP18.54■□□□□ 0.56
CLN6-202ENST00000538696 SLC11A1P49279 550 aa18.54■□□□□ 0.56
CLN6-202ENST00000538696 MXI1P50539 228 aa18.54■□□□□ 0.56
CLN6-202ENST00000538696 DPY19L2P1Q6NXN4 242 aa18.54■□□□□ 0.56
CLN6-202ENST00000538696 NEK11Q8NG66 645 aa18.54■□□□□ 0.56
CLN6-202ENST00000538696 KIAA1524Q8TCG1 905 aa18.54■□□□□ 0.56
CLN6-202ENST00000538696 RABGGTAQ92696 567 aa18.54■□□□□ 0.56
CLN6-202ENST00000538696 GANQ9H2C0 597 aa18.54■□□□□ 0.56
CLN6-202ENST00000538696 TMEM8AQ9HCN3 771 aa18.54■□□□□ 0.56
CLN6-202ENST00000538696 ABHD10Q9NUJ1 306 aa18.54■□□□□ 0.56
CLN6-202ENST00000538696 ITGA11Q9UKX5 1188 aa18.54■□□□□ 0.56
CLN6-202ENST00000538696 VWA8A3KMH1 1905 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 A0A1W2PPC1 479 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 A0A1W2PQJ5 194 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 LINC01553A4QN01 128 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 PODXLO00592 558 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 NOL4O94818 638 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 VNN1O95497 513 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 ITGB3P05106 788 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 CA3P07451 260 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 LAG3P18627 525 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 SLC9A1P19634 815 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 FECHP22830 423 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 POLR2BP30876 1174 aaKnown RBP18.53■□□□□ 0.56
CLN6-202ENST00000538696 PBX3P40426 434 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 OR1G1P47890 313 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 CLCNKBP51801 687 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 MYL7Q01449 175 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 BIRC3Q13489 604 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 SPOUT1Q5T280 376 aaKnown RBP18.53■□□□□ 0.56
CLN6-202ENST00000538696 C9orf57Q5W0N0 161 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms