RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 WDR4P57081 412 aaKnown RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 CAMK2BQ13554 666 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 MESDQ14696 234 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 RCN1Q15293 331 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 SIX1Q15475 284 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 TAF1BQ53T94 588 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 SGO2Q562F6 1265 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 DAB2IPQ5VWQ8 1189 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 ARHGAP24Q8N264 748 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 SYT2Q8N9I0 419 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 DDX17Q92841 729 aaKnown RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 CD101Q93033 1021 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 EIF2AK1Q9BQI3 630 aaKnown RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 PCMTD2Q9NV79 361 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 STX18Q9P2W9 335 aaKnown RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 TBK1Q9UHD2 729 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 EIF3DO15371 548 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 TBCAO75347 108 aaKnown RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 PENKP01210 267 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 TROVE2P10155 538 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 GSTT1P30711 240 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 KCNJ1P48048 391 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 MARCKSL1P49006 195 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 CASP4P49662 377 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 GEMIN4P57678 1058 aaKnown RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 SESN3P58005 492 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 KHDC1Q4VXA5 237 aaKnown RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 ERAP2Q6P179 960 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 CYP4X1Q8N118 509 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 EPS8L1Q8TE68 723 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 COA7Q96BR5 231 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 SLC4A9Q96Q91 983 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 ZNF184Q99676 751 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 SGIP1Q9BQI5 828 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 CENPKQ9BS16 269 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 BTBD10Q9BSF8 475 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 GPR88Q9GZN0 384 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 INTS2Q9H0H0 1204 aaKnown RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 ZWILCHQ9H900 591 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 TAS2R14Q9NYV8 317 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 ARFGEF1Q9Y6D6 1849 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 WNK3Q9BYP7 1800 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 PNMA6FA0A0J9YX94 578 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 A8MXQ7 604 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 FSCN2O14926 492 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 EXOC3O60645 756 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 GCNT3O95395 438 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 CBX6O95503 412 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 CHKAP35790 457 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 ITGA8P53708 1063 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 SF3B3Q15393 1217 aaKnown RBP9.56□□□□□ -0.88
SNHG1-209ENST00000538654 TDRPQ86YL5 185 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 MIPOL1Q8TD10 442 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 DENND1AQ8TEH3 1009 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 NCSTNQ92542 709 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 CFAP57Q96MR6 1250 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 SMC6Q96SB8 1091 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 REEP2Q9BRK0 252 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 MIS12Q9H081 205 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 EURLQ9NYK6 297 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 ATXN10Q9UBB4 475 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 ANGPTL2Q9UKU9 493 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 TMCO1Q9UM00 188 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 NIP7Q9Y221 180 aaKnown RBP eCLIP9.56□□□□□ -0.884e-44■■■■■ 26.8
SNHG1-209ENST00000538654 CAPN9O14815 690 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 TP73O15350 636 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 NBNO60934 754 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 PSMG1O95456 288 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 MYBL1P10243 752 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 IMPDH2P12268 514 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 GZMAP12544 262 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 TMED2Q15363 201 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 RASIP1Q5U651 963 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 C16orf87Q6PH81 154 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 C16orf86Q6ZW13 317 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 NLRP9Q7RTR0 991 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 CLNKQ7Z7G1 428 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 TRABD2AQ86V40 505 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 LCA5Q86VQ0 697 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 SH3RF3Q8TEJ3 882 aaPredicted RBP9.56□□□□□ -0.88
SNHG1-209ENST00000538654 MAML1Q92585 1016 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 AZIN2Q96A70 460 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 MCUR1Q96AQ8 359 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 OLFM3Q96PB7 478 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 ANKRD2Q9GZV1 360 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 OLFML3Q9NRN5 406 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 DDX43Q9NXZ2 648 aaKnown RBP9.56□□□□□ -0.88
SNHG1-209ENST00000538654 INPP5FQ9Y2H2 1132 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 COMMD3-BMI1R4GMX3 469 aa9.56□□□□□ -0.88
SNHG1-209ENST00000538654 NHSQ6T4R5 1651 aa9.55□□□□□ -0.88
SNHG1-209ENST00000538654 MYO3BQ8WXR4 1341 aa9.55□□□□□ -0.88
SNHG1-209ENST00000538654 GSTTP1A0A1W2PQM5 241 aa9.55□□□□□ -0.88
SNHG1-209ENST00000538654 TCRBV7S2A1N4TA0A589 114 aa9.55□□□□□ -0.88
SNHG1-209ENST00000538654 MED24O75448 989 aa9.55□□□□□ -0.88
SNHG1-209ENST00000538654 PYGLP06737 847 aa9.55□□□□□ -0.88
SNHG1-209ENST00000538654 ADCY8P40145 1251 aa9.55□□□□□ -0.88
SNHG1-209ENST00000538654 NOVP48745 357 aa9.55□□□□□ -0.88
SNHG1-209ENST00000538654 CDK8P49336 464 aa9.55□□□□□ -0.88
SNHG1-209ENST00000538654 MYL7Q01449 175 aa9.55□□□□□ -0.88
SNHG1-209ENST00000538654 GRM1Q13255 1194 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms