RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 SCFD1Q8WVM8 642 aa12.46□□□□□ -0.41
SNHG1-206ENST00000537925 POF1BQ8WVV4 589 aa12.46□□□□□ -0.41
SNHG1-206ENST00000537925 SNX27Q96L92 541 aa12.46□□□□□ -0.41
SNHG1-206ENST00000537925 PPP1R10Q96QC0 940 aaKnown RBP12.46□□□□□ -0.41
SNHG1-206ENST00000537925 MYO1AQ9UBC5 1043 aa12.46□□□□□ -0.41
SNHG1-206ENST00000537925 CTNND2Q9UQB3 1225 aa12.46□□□□□ -0.41
SNHG1-206ENST00000537925 ADGRG1Q9Y653 693 aa12.46□□□□□ -0.41
SNHG1-206ENST00000537925 UBE4BO95155 1302 aa12.46□□□□□ -0.41
SNHG1-206ENST00000537925 MTCL1Q9Y4B5 1905 aaKnown RBP12.46□□□□□ -0.42
SNHG1-206ENST00000537925 SMIM28A0A1B0GU29 152 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 NRP1O14786 923 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 TEX33O43247 280 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 URI1O94763 535 aaPredicted RBP12.46□□□□□ -0.42
SNHG1-206ENST00000537925 RHOBTB3O94955 611 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 CLTAP09496 248 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 KCNE1P15382 129 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 GARTP22102 1010 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 TNFSF9P41273 254 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 COPB1P53618 953 aaKnown RBP12.46□□□□□ -0.42
SNHG1-206ENST00000537925 GNG11P61952 73 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 STK4Q13043 487 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 TUSC3Q13454 348 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 BMS1Q14692 1282 aaKnown RBP12.46□□□□□ -0.42
SNHG1-206ENST00000537925 KRT31Q15323 416 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 BMT2Q1RMZ1 405 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 ERCC6LQ2NKX8 1250 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 SLC10A6Q3KNW5 377 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 TCP11X2Q5H9J9 407 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 ZBTB41Q5SVQ8 909 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 KLHL10Q6JEL2 608 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 SYCP3Q8IZU3 236 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 ADSSL1Q8N142 457 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 MAFAQ8NHW3 353 aaPredicted RBP12.46□□□□□ -0.42
SNHG1-206ENST00000537925 BCL7CQ8WUZ0 217 aaPredicted RBP12.46□□□□□ -0.42
SNHG1-206ENST00000537925 TMEM169Q96HH4 297 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 IGSF21Q96ID5 467 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 ZMAT2Q96NC0 199 aaKnown RBP12.46□□□□□ -0.42
SNHG1-206ENST00000537925 MSTO1Q9BUK6 570 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 THAP9Q9H5L6 903 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 SLC39A2Q9NP94 309 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 EXOC1Q9NV70 894 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 CNTN3Q9P232 1028 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 CPSF3Q9UKF6 684 aaKnown RBP12.46□□□□□ -0.42
SNHG1-206ENST00000537925 AGO2Q9UKV8 859 aaKnown RBP12.46□□□□□ -0.42
SNHG1-206ENST00000537925 FAN1Q9Y2M0 1017 aa12.46□□□□□ -0.42
SNHG1-206ENST00000537925 XIRP2A4UGR9 3374 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 SCN1AP35498 2009 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 TTC26A0AVF1 554 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 EFEMP2O95967 443 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 GYPCP04921 128 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 ADRB2P07550 413 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 CXCL8P10145 99 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 OR1G1P47890 313 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 ERVFC1P60507 584 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 POU5F1Q01860 360 aaKnown RBP12.45□□□□□ -0.42
SNHG1-206ENST00000537925 KRT17Q04695 432 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 GOLGA8FQ08AF8 430 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 GOLGA8DPQ0D2H9 430 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 STIM1Q13586 685 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 ENOX2Q16206 610 aaKnown RBP12.45□□□□□ -0.42
SNHG1-206ENST00000537925 ARHGAP29Q52LW3 1261 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 RSRC2Q7L4I2 434 aaKnown RBP12.45□□□□□ -0.42
SNHG1-206ENST00000537925 GPR161Q8N6U8 529 aaKnown RBP12.45□□□□□ -0.42
SNHG1-206ENST00000537925 KIAA0895Q8NCT3 520 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 NELFBQ8WX92 580 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 POMGNT1Q8WZA1 660 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 RABGGTAQ92696 567 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 FAM122AQ96E09 287 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 PLEKHA5Q9HAU0 1116 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 MARCH5Q9NX47 278 aa12.45□□□□□ -0.42
SNHG1-206ENST00000537925 PUF60Q9UHX1 559 aaKnown RBP12.45□□□□□ -0.42
SNHG1-206ENST00000537925 KCNJ18B7U540 433 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 FSCN2O14926 492 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 TGFB1I1O43294 461 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 KIF5CO60282 957 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 ZRANB2O95218 330 aaKnown RBP eCLIP12.44□□□□□ -0.422e-9■■■■■ 30
SNHG1-206ENST00000537925 KIF20AO95235 890 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 IRS1P35568 1242 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 CLCN6P51797 869 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 STX17P56962 302 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 KCNJ12Q14500 433 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 TIGD5Q53EQ6 642 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 HSP90AA4PQ58FG1 418 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 GLRA4Q5JXX5 417 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 CRELD2Q6UXH1 353 aaPredicted RBP12.44□□□□□ -0.42
SNHG1-206ENST00000537925 ZNF662Q6ZS27 426 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 DDX53Q86TM3 631 aaKnown RBP12.44□□□□□ -0.42
SNHG1-206ENST00000537925 CCDC47Q96A33 483 aaKnown RBP12.44□□□□□ -0.42
SNHG1-206ENST00000537925 IQCDQ96DY2 449 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 DHTKD1Q96HY7 919 aaPredicted RBP12.44□□□□□ -0.42
SNHG1-206ENST00000537925 PAAF1Q9BRP4 392 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 VN1R3Q9BXE9 311 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 TLR9Q9NR96 1032 aa12.44□□□□□ -0.42
SNHG1-206ENST00000537925 PRG3Q9Y2Y8 225 aaPredicted RBP12.44□□□□□ -0.42
SNHG1-206ENST00000537925 PLXNA3P51805 1871 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 LGALS16A8MUM7 142 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 F8W810 466 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 PSMA7O14818 248 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 LDHAP00338 332 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms