RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 NEU2Q9Y3R4 380 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 FOXO6A8MYZ6 492 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 PSTPIP1O43586 416 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 KCNA3P22001 575 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 NOMO3P69849 1222 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 SNRNP48Q6IEG0 339 aaKnown RBP15.23■□□□□ 0.03
USP44-203ENST00000537435 TMEM270Q6UE05 265 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 ZNF365Q70YC5 407 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 ANKRD42Q8N9B4 389 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 NSUN6Q8TEA1 469 aaKnown RBP15.23■□□□□ 0.03
USP44-203ENST00000537435 OSBPL8Q9BZF1 889 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 GINM1Q9NU53 330 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.23■□□□□ 0.03
USP44-203ENST00000537435 USTQ9Y2C2 406 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 PCDHB4Q9Y5E5 795 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 CD2APQ9Y5K6 639 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 SNX3O60493 162 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 GNA15P30679 374 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 SSR1P43307 286 aaKnown RBP15.22■□□□□ 0.03
USP44-203ENST00000537435 STRN3Q13033 797 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 MAMLD1Q13495 774 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 CUL2Q13617 745 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 TNFAIP1Q13829 316 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 CCNG2Q16589 344 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 CIAPIN1Q6FI81 312 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 ABHD15Q6UXT9 468 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 TRPM8Q7Z2W7 1104 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 ABRAQ8N0Z2 381 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 ZBTB45Q96K62 511 aaPredicted RBP15.22■□□□□ 0.03
USP44-203ENST00000537435 HAPLN2Q9GZV7 340 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 VPS33BQ9H267 617 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 MLXIPLQ9NP71 852 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 KCNK9Q9NPC2 374 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 STK32BQ9NY57 414 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 NFASCO94856 1347 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 CD58P19256 250 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 POLGP54098 1239 aaPredicted RBP15.22■□□□□ 0.03
USP44-203ENST00000537435 EMC2Q15006 297 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 SNCBQ16143 134 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 CRELD2Q6UXH1 353 aaPredicted RBP15.22■□□□□ 0.03
USP44-203ENST00000537435 TRIM72Q6ZMU5 477 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 ANKS1BQ7Z6G8 1248 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 TMEM143Q96AN5 459 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 PDGFDQ9GZP0 370 aaPredicted RBP15.22■□□□□ 0.03
USP44-203ENST00000537435 MRPL47Q9HD33 250 aaKnown RBP15.22■□□□□ 0.03
USP44-203ENST00000537435 SLC12A4Q9UP95 1085 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 STYXL1Q9Y6J8 313 aa15.22■□□□□ 0.03
USP44-203ENST00000537435 TCP11X1B4DZS4 312 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 GJB6O95452 261 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 GSTA1P08263 222 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 XKR3Q5GH77 459 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 ZBTB41Q5SVQ8 909 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 IZUMO3Q5VZ72 239 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 PRUNE1Q86TP1 453 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 KATNAL2Q8IYT4 538 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 CYP4X1Q8N118 509 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 CCDC89Q8N998 374 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 REPS2Q8NFH8 660 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 ZKSCAN4Q969J2 545 aaPredicted RBP15.21■□□□□ 0.03
USP44-203ENST00000537435 ABCF3Q9NUQ8 709 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 FGFR1OP2Q9NVK5 253 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 RBAKQ9NYW8 714 aaPredicted RBP15.21■□□□□ 0.03
USP44-203ENST00000537435 ZNF541Q9H0D2 1346 aa15.21■□□□□ 0.03
USP44-203ENST00000537435 TLR3O15455 904 aaKnown RBP15.21■□□□□ 0.02
USP44-203ENST00000537435 POTEJP0CG39 1038 aa15.21■□□□□ 0.02
USP44-203ENST00000537435 CETPP11597 493 aa15.21■□□□□ 0.02
USP44-203ENST00000537435 BRAFP15056 766 aa15.21■□□□□ 0.02
USP44-203ENST00000537435 ABCD1P33897 745 aa15.21■□□□□ 0.02
USP44-203ENST00000537435 BACE1P56817 501 aa15.21■□□□□ 0.02
USP44-203ENST00000537435 FAM133BQ5BKY9 247 aaKnown RBP15.21■□□□□ 0.02
USP44-203ENST00000537435 PLEKHA7Q6IQ23 1121 aa15.21■□□□□ 0.02
USP44-203ENST00000537435 MIS18BP1Q6P0N0 1132 aa15.21■□□□□ 0.02
USP44-203ENST00000537435 BBOF1Q8ND07 529 aa15.21■□□□□ 0.02
USP44-203ENST00000537435 A1CFQ9NQ94 594 aaKnown RBP15.21■□□□□ 0.02
USP44-203ENST00000537435 TBK1Q9UHD2 729 aa15.21■□□□□ 0.02
USP44-203ENST00000537435 TPX2Q9ULW0 747 aaKnown RBP15.21■□□□□ 0.02
USP44-203ENST00000537435 FER1L6Q2WGJ9 1857 aa15.21■□□□□ 0.02
USP44-203ENST00000537435 TCEA3O75764 348 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 PHF13Q86YI8 300 aaPredicted RBP15.2■□□□□ 0.02
USP44-203ENST00000537435 RBBP8NLQ8NC74 664 aaPredicted RBP15.2■□□□□ 0.02
USP44-203ENST00000537435 ASAP3Q8TDY4 903 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 VCPIP1Q96JH7 1222 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 CDHR1Q96JP9 859 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 C9orf72Q96LT7 481 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 KLHL11Q9NVR0 708 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 RGPD3A6NKT7 1758 aaPredicted RBP15.2■□□□□ 0.02
USP44-203ENST00000537435 RGPD4Q7Z3J3 1758 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 LRRIQ4A6NIV6 560 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 OAS1P00973 400 aaKnown RBP15.2■□□□□ 0.02
USP44-203ENST00000537435 CLTAP09496 248 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 SUPT20HL2P0C7V6 817 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 MPP2Q14168 576 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 SUPT20HL1Q3ZLR7 823 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 NUGGCQ68CJ6 796 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 GSTA5Q7RTV2 222 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 FAM228AQ86W67 206 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 EXD1Q8NHP7 514 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 GDAP1Q8TB36 358 aa15.2■□□□□ 0.02
USP44-203ENST00000537435 TARS2Q9BW92 718 aaKnown RBP15.2■□□□□ 0.02
USP44-203ENST00000537435 ANKFY1Q9P2R3 1169 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms