RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 C9orf72Q96LT7 481 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 PWWP2AQ96N64 755 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 RBM15Q96T37 977 aaKnown RBP eCLIP12.84□□□□□ -0.35
PTCD2-211ENST00000536805 OSBPL1AQ9BXW6 950 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 RANBP17Q9H2T7 1088 aaKnown RBP12.84□□□□□ -0.35
PTCD2-211ENST00000536805 TLE6Q9H808 572 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 ARHGEF10LQ9HCE6 1279 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 NKX1-2Q9UD57 310 aaPredicted RBP12.84□□□□□ -0.35
PTCD2-211ENST00000536805 SMCHD1A6NHR9 2005 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 NDC80O14777 642 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 ZC3H11AO75152 810 aaKnown RBP eCLIP12.84□□□□□ -0.35
PTCD2-211ENST00000536805 LMNAP02545 664 aaKnown RBP12.84□□□□□ -0.35
PTCD2-211ENST00000536805 ATP6V1C1P21283 382 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 TARSP26639 723 aaKnown RBP12.84□□□□□ -0.35
PTCD2-211ENST00000536805 VPS41P49754 854 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 CACNB3P54284 484 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 FKBP1AP62942 108 aaKnown RBP12.84□□□□□ -0.35
PTCD2-211ENST00000536805 DNAJC3Q13217 504 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 LLGL1Q15334 1064 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 UMODL1Q5DID0 1318 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 USP37Q86T82 979 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 CBWD2Q8IUF1 395 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 RHOT1Q8IXI2 618 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 LMNTD2Q8IXW0 634 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.84□□□□□ -0.35
PTCD2-211ENST00000536805 KCNV2Q8TDN2 545 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 SLC7A6OSQ96CW6 309 aaPredicted RBP12.84□□□□□ -0.35
PTCD2-211ENST00000536805 MXRA8Q9BRK3 442 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 TRABDQ9H4I3 376 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 SSU72Q9NP77 194 aaKnown RBP12.84□□□□□ -0.35
PTCD2-211ENST00000536805 RAB20Q9NX57 234 aa12.84□□□□□ -0.35
PTCD2-211ENST00000536805 NFASCO94856 1347 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 DNALI1O14645 258 aaPredicted RBP12.83□□□□□ -0.36
PTCD2-211ENST00000536805 GH2P01242 217 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 ACADSP16219 412 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 RXRBP28702 533 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 UBXN2AP68543 259 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 MRPS35P82673 323 aaKnown RBP12.83□□□□□ -0.36
PTCD2-211ENST00000536805 CCDC142Q17RM4 750 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 DOK7Q18PE1 504 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 SLC45A4Q5BKX6 768 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 EP400NLQ6ZTU2 488 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 NIPA1Q7RTP0 329 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 EXD1Q8NHP7 514 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 LRRC8CQ8TDW0 803 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 ASAP3Q8TDY4 903 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 ZNF483Q8TF39 744 aaPredicted RBP12.83□□□□□ -0.36
PTCD2-211ENST00000536805 SMC6Q96SB8 1091 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 PAIP2Q9BPZ3 127 aaKnown RBP12.83□□□□□ -0.36
PTCD2-211ENST00000536805 OSBPL8Q9BZF1 889 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 KIAA1683Q9H0B3 1180 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 DEFB129Q9H1M3 183 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 KIAA1586Q9HCI6 787 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 SAR1AQ9NR31 198 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 SPATS2LQ9NUQ6 558 aaKnown RBP12.83□□□□□ -0.36
PTCD2-211ENST00000536805 LNPEPQ9UIQ6 1025 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 HAO1Q9UJM8 370 aa12.83□□□□□ -0.36
PTCD2-211ENST00000536805 MYPNQ86TC9 1320 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 GOLGA8IPA6NC78 632 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 GOLGA8JA6NMD2 632 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 HGSO14964 777 aaPredicted RBP12.82□□□□□ -0.36
PTCD2-211ENST00000536805 T-ENOLP0DO92 83 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 FDX1P10109 184 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 RAD23BP54727 409 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 ADCY1Q08828 1119 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 P3H1Q32P28 736 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 CYP4F22Q6NT55 531 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 DRICH1Q6PGQ1 229 aaPredicted RBP12.82□□□□□ -0.36
PTCD2-211ENST00000536805 MAEAQ7L5Y9 396 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 LONP2Q86WA8 852 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 OGFOD1Q8N543 542 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.82□□□□□ -0.36
PTCD2-211ENST00000536805 TAS1R2Q8TE23 839 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 DHX38Q92620 1227 aaKnown RBP12.82□□□□□ -0.36
PTCD2-211ENST00000536805 MFSD14AQ96MC6 490 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 FBXL18Q96ME1 805 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 NUDCD1Q96RS6 583 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 TBC1D10AQ9BXI6 508 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 SAYSD1Q9NPB0 183 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 CYLDQ9NQC7 956 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 SLC24A2Q9UI40 661 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 ZHX2Q9Y6X8 837 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 ANKRD31Q8N7Z5 1873 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 C2CD2LO14523 706 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 SPAG7O75391 227 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 CYP1A1P04798 512 aaPredicted RBP12.82□□□□□ -0.36
PTCD2-211ENST00000536805 LINGO3P0C6S8 592 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 KRT5P13647 590 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 NSFP46459 744 aaKnown RBP12.82□□□□□ -0.36
PTCD2-211ENST00000536805 JAG1P78504 1218 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 AOC3Q16853 763 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 TSNAXIP1Q2TAA8 658 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 LIN9Q5TKA1 542 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 MON1BQ7L1V2 547 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 MAP4K3Q8IVH8 894 aa12.82□□□□□ -0.36
PTCD2-211ENST00000536805 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.82□□□□□ -0.365e-17■■■■■ 409.9
PTCD2-211ENST00000536805 ZNF646O15015 1829 aaPredicted RBP12.81□□□□□ -0.36
PTCD2-211ENST00000536805 G3V3G9 751 aa12.81□□□□□ -0.36
PTCD2-211ENST00000536805 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
PTCD2-211ENST00000536805 SLC16A4O15374 487 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms