RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 SENP6Q9GZR1 1112 aaPredicted RBP3.49□□□□□ -1.85
SKA3-207ENST00000536239 GSTO2Q9H4Y5 243 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.49□□□□□ -1.85
SKA3-207ENST00000536239 LANCL2Q9NS86 450 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 DPP7Q9UHL4 492 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 PADI4Q9UM07 663 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 LRP12Q9Y561 859 aa3.49□□□□□ -1.85
SKA3-207ENST00000536239 GCOM1H8Y6P7 765 aaPredicted RBP3.48□□□□□ -1.85
SKA3-207ENST00000536239 PPEF2O14830 753 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 INSIG1O15503 277 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 FKBP9O95302 570 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 CHRM2P08172 466 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 ALAS1P13196 640 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 FPR1P21462 350 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 EPHB2P29323 1055 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 ADCYAP1R1P41586 468 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 IL2P60568 153 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 RAPGEF1Q13905 1077 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 PDCD1Q15116 288 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 FKBP9P1Q75LS8 142 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 YTHDF3Q7Z739 585 aaKnown RBP3.48□□□□□ -1.85
SKA3-207ENST00000536239 PMFBP1Q8TBY8 1022 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 CASKIN2Q8WXE0 1202 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 HOXB13Q92826 284 aaPredicted RBP3.48□□□□□ -1.85
SKA3-207ENST00000536239 SLC5A5Q92911 643 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 TMEM125Q96AQ2 219 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 RAX2Q96IS3 184 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 LDAHQ9H6V9 325 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 KANSL2Q9H9L4 492 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 EMC7Q9NPA0 242 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 ANLNQ9NQW6 1124 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 SCOCQ9UIL1 159 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 AJAP1Q9UKB5 411 aaPredicted RBP3.48□□□□□ -1.85
SKA3-207ENST00000536239 ACTL7AQ9Y615 435 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 DCAF1Q9Y4B6 1507 aa3.48□□□□□ -1.85
SKA3-207ENST00000536239 PRAMEF33A0A0G2JMD5 474 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 CDHR4A6H8M9 788 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 TEX33O43247 280 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 PRAMEF10O60809 474 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 CD1AP06126 327 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 CERS1P27544 350 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 MPGP29372 298 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 POLGP54098 1239 aaPredicted RBP3.47□□□□□ -1.85
SKA3-207ENST00000536239 RPS7P62081 194 aaKnown RBP3.47□□□□□ -1.85
SKA3-207ENST00000536239 FPGSQ05932 587 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 SEPT7Q16181 437 aaKnown RBP3.47□□□□□ -1.85
SKA3-207ENST00000536239 FSCN1Q16658 493 aaKnown RBP3.47□□□□□ -1.85
SKA3-207ENST00000536239 CNNM4Q6P4Q7 775 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 MYCBPAPQ8TBZ2 947 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 TBC1D15Q8TC07 691 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 TMEM140Q9NV12 185 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 TMEM260Q9NX78 707 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 MTMR4Q9NYA4 1195 aa3.47□□□□□ -1.85
SKA3-207ENST00000536239 WDR27A2RRH5 827 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 SNHG28P0DPA3 235 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 FCER1AP12319 257 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 PCSK1P29120 753 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 NR4A2P43354 598 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 CCT2P78371 535 aaKnown RBP3.46□□□□□ -1.86
SKA3-207ENST00000536239 LAMB3Q13751 1172 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 ADRM1Q16186 407 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.46□□□□□ -1.86
SKA3-207ENST00000536239 ZNF66Q6ZN08 573 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 CLNKQ7Z7G1 428 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 ZDHHC17Q8IUH5 632 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 SAMD14Q8IZD0 417 aaPredicted RBP3.46□□□□□ -1.86
SKA3-207ENST00000536239 SYNPOQ8N3V7 929 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 OR2W6PQ8NHA6 318 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 SH3TC2Q8TF17 1288 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 TSPEARQ8WU66 669 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 FATE1Q969F0 183 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 QTRT1Q9BXR0 403 aaKnown RBP3.46□□□□□ -1.86
SKA3-207ENST00000536239 GREM2Q9H772 168 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 RBM12Q9NTZ6 932 aaKnown RBP3.46□□□□□ -1.86
SKA3-207ENST00000536239 ELOVL5Q9NYP7 299 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 SERGEFQ9UGK8 458 aa3.46□□□□□ -1.86
SKA3-207ENST00000536239 CDK11AQ9UQ88 783 aaPredicted RBP3.46□□□□□ -1.86
SKA3-207ENST00000536239 FNDC1Q4ZHG4 1894 aaPredicted RBP3.45□□□□□ -1.86
SKA3-207ENST00000536239 TCRBV7S2A1N4TA0A589 114 aa3.45□□□□□ -1.86
SKA3-207ENST00000536239 VWC2LB2RUY7 222 aa3.45□□□□□ -1.86
SKA3-207ENST00000536239 TARM1B6A8C7 271 aa3.45□□□□□ -1.86
SKA3-207ENST00000536239 TOP3BO95985 862 aaKnown RBP3.45□□□□□ -1.86
SKA3-207ENST00000536239 KCNA2P16389 499 aa3.45□□□□□ -1.86
SKA3-207ENST00000536239 ENPP1P22413 925 aa3.45□□□□□ -1.86
SKA3-207ENST00000536239 PPP3CAQ08209 521 aa3.45□□□□□ -1.86
SKA3-207ENST00000536239 C21orf62-AS1Q17RA5 79 aa3.45□□□□□ -1.86
SKA3-207ENST00000536239 ZNF260Q3ZCT1 412 aa3.45□□□□□ -1.86
SKA3-207ENST00000536239 CD300EQ496F6 205 aaPredicted RBP3.45□□□□□ -1.86
SKA3-207ENST00000536239 SLC18B1Q6NT16 456 aa3.45□□□□□ -1.86
SKA3-207ENST00000536239 AHI1Q8N157 1196 aa3.45□□□□□ -1.86
SKA3-207ENST00000536239 ACAP3Q96P50 834 aa3.45□□□□□ -1.86
SKA3-207ENST00000536239 SPRTNQ9H040 489 aaPredicted RBP3.45□□□□□ -1.86
SKA3-207ENST00000536239 VSX1Q9NZR4 365 aaPredicted RBP3.45□□□□□ -1.86
SKA3-207ENST00000536239 NEU2Q9Y3R4 380 aa3.45□□□□□ -1.86
SKA3-207ENST00000536239 PRR23D1E9PI22 279 aaPredicted RBP3.44□□□□□ -1.86
SKA3-207ENST00000536239 PPP6CO00743 305 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 URI1O94763 535 aaPredicted RBP3.44□□□□□ -1.86
SKA3-207ENST00000536239 TTLL1O95922 423 aa3.44□□□□□ -1.86
SKA3-207ENST00000536239 HNRNPCP07910 306 aaKnown RBP eCLIP3.44□□□□□ -1.86
SKA3-207ENST00000536239 PRR23D2P0DMB1 279 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms