RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 HOXC10Q9NYD6 342 aa4.83□□□□□ -1.64
YBX3-205ENST00000536107 ANKFY1Q9P2R3 1169 aa4.83□□□□□ -1.64
YBX3-205ENST00000536107 FTSJ1Q9UET6 329 aa4.83□□□□□ -1.64
YBX3-205ENST00000536107 USP18Q9UMW8 372 aa4.83□□□□□ -1.64
YBX3-205ENST00000536107 ZFYVE26Q68DK2 2539 aa4.83□□□□□ -1.64
YBX3-205ENST00000536107 ASPMQ8IZT6 3477 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 TNKSO95271 1327 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 MROH5Q6ZUA9 1318 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 SPEF2Q9C093 1822 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 LINC01565O15544 149 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 TBX10O75333 385 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 GJB5O95377 273 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 IQCF3P0C7M6 154 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 PAMP19021 973 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 SP100P23497 879 aaPredicted RBP4.82□□□□□ -1.64
YBX3-205ENST00000536107 MCM4P33991 863 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 STAT5AP42229 794 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 BTDP43251 543 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 SLC6A11P48066 632 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 RRP1P56182 461 aaKnown RBP4.82□□□□□ -1.64
YBX3-205ENST00000536107 PSMC6P62333 389 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 DEFB103AP81534 67 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 DGCR2P98153 550 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 HYAL1Q12794 435 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 CCDC105Q8IYK2 499 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 TAB3Q8N5C8 712 aaPredicted RBP4.82□□□□□ -1.64
YBX3-205ENST00000536107 RIN2Q8WYP3 895 aaPredicted RBP4.82□□□□□ -1.64
YBX3-205ENST00000536107 PPP2R3CQ969Q6 453 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 CLIC6Q96NY7 704 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 GNRHR2Q96P88 292 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 SEZ6LQ9BYH1 1024 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 TANGO6Q9C0B7 1094 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 RPAP3Q9H6T3 665 aaPredicted RBP4.82□□□□□ -1.64
YBX3-205ENST00000536107 TRMT13Q9NUP7 481 aaKnown RBP4.82□□□□□ -1.64
YBX3-205ENST00000536107 HERC5Q9UII4 1024 aaKnown RBP4.82□□□□□ -1.64
YBX3-205ENST00000536107 ADAM29Q9UKF5 820 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 ZDHHC9Q9Y397 364 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 INSL6Q9Y581 213 aa4.82□□□□□ -1.64
YBX3-205ENST00000536107 KMT2EQ8IZD2 1858 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 CEP250Q9BV73 2442 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 NPHP3-ACAD11A0A0J9YXS1 232 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 H3BNC9 293 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 CHL1O00533 1208 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 KINO60870 393 aaKnown RBP4.81□□□□□ -1.64
YBX3-205ENST00000536107 IFIT1P09914 478 aaKnown RBP4.81□□□□□ -1.64
YBX3-205ENST00000536107 HSPA5P11021 654 aaKnown RBP4.81□□□□□ -1.64
YBX3-205ENST00000536107 VCAM1P19320 739 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 GTF2F1P35269 517 aaKnown RBP eCLIP4.81□□□□□ -1.64
YBX3-205ENST00000536107 RBM25P49756 843 aaKnown RBP4.81□□□□□ -1.64
YBX3-205ENST00000536107 ACVR2BQ13705 512 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 COG2Q14746 738 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 SHROOM1Q2M3G4 852 aaPredicted RBP4.81□□□□□ -1.64
YBX3-205ENST00000536107 CCDC144BQ3MJ40 725 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 LBX2Q6XYB7 198 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 MILR1Q7Z6M3 343 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 SLC43A3Q8NBI5 491 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 AGAP2Q99490 1192 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 HNRNPABQ99729 332 aaKnown RBP4.81□□□□□ -1.64
YBX3-205ENST00000536107 PUS3Q9BZE2 481 aaKnown RBP4.81□□□□□ -1.64
YBX3-205ENST00000536107 ALDH8A1Q9H2A2 487 aaPredicted RBP4.81□□□□□ -1.64
YBX3-205ENST00000536107 GNL3LQ9NVN8 582 aaKnown RBP4.81□□□□□ -1.64
YBX3-205ENST00000536107 PI4KBQ9UBF8 816 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 ZBTB21Q9ULJ3 1066 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 USP15Q9Y4E8 981 aaPredicted RBP4.81□□□□□ -1.64
YBX3-205ENST00000536107 BACE2Q9Y5Z0 518 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 GBF1Q92538 1859 aa4.81□□□□□ -1.64
YBX3-205ENST00000536107 ROBO3Q96MS0 1386 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 GRIN2DO15399 1336 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 C2orf71A6NGG8 1288 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 E9PSI1 815 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 PI15O43692 258 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 EYA4O95677 639 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 SLC25A27O95847 323 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 GH2P01242 217 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 TP53P04637 393 aaPredicted RBP4.8□□□□□ -1.64
YBX3-205ENST00000536107 COMTP21964 271 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 IL12RB1P42701 662 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 BFSP2Q13515 415 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 PPP2R5DQ14738 602 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 TCEAL1Q15170 157 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 FSCN1Q16658 493 aaKnown RBP4.8□□□□□ -1.64
YBX3-205ENST00000536107 AGBL4Q5VU57 503 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 PCSK4Q6UW60 755 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 UNQ6494/PRO21346Q6UXR6 183 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 MYOCDQ8IZQ8 938 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 ZSWIM3Q96MP5 696 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 PLEKHF1Q96S99 279 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 YME1L1Q96TA2 773 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 RTP3Q9BQQ7 232 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 UPF3AQ9H1J1 476 aaKnown RBP4.8□□□□□ -1.64
YBX3-205ENST00000536107 COPRSQ9NQ92 184 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 GINM1Q9NU53 330 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 UBP1Q9NZI7 540 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 ABCF2Q9UG63 623 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 SORCS3Q9UPU3 1222 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 NAV2Q8IVL1 2488 aa4.8□□□□□ -1.64
YBX3-205ENST00000536107 DOCK1Q14185 1865 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 FRYLO94915 3013 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 LOC285556D6RIA3 1793 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms